RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
PFDN6-202ENST00000374607 CCDC32Q9BV29 185 aa12.09□□□□□ -0.47
PFDN6-202ENST00000374607 SLC2A8Q9NY64 477 aa12.09□□□□□ -0.47
PFDN6-202ENST00000374607 TEX13DA0A0J9YY54 714 aaPredicted RBP12.08□□□□□ -0.48
PFDN6-202ENST00000374607 MPPED1O15442 326 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 RAMP3O60896 148 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 ACTL6BO94805 426 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 SERPINE2P07093 398 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 CTSDP07339 412 aaPredicted RBP12.08□□□□□ -0.48
PFDN6-202ENST00000374607 F2RP25116 425 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 SLC35B1P78383 322 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 SSX9Q7RTT3 188 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 KLHDC1Q8N7A1 406 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 GON7Q9BXV9 100 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 PARP11Q9NR21 331 aa12.08□□□□□ -0.48
PFDN6-202ENST00000374607 AP4M1O00189 453 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 RBFOX2O43251 390 aaKnown RBP eCLIP12.07□□□□□ -0.48
PFDN6-202ENST00000374607 IGHG2P01859 326 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 HLA-DRB1P01911 266 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 VDAC1P21796 283 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 CD40LGP29965 261 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 LPAR6P43657 344 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 UBE2KP61086 200 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 PPP1R27Q86WC6 154 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 TEX45Q8NA69 505 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 CHPT1Q8WUD6 406 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 SDHCQ99643 169 aaPredicted RBP12.07□□□□□ -0.48
PFDN6-202ENST00000374607 C7orf50Q9BRJ6 194 aaKnown RBP12.07□□□□□ -0.48
PFDN6-202ENST00000374607 LINC00527Q9UJ94 153 aa12.07□□□□□ -0.48
PFDN6-202ENST00000374607 C3orf85A0A1B0GTC6 90 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 SRRM4A7MD48 611 aaKnown RBP12.06□□□□□ -0.48
PFDN6-202ENST00000374607 CA2P00918 260 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 SAA1P0DJI8 122 aaPredicted RBP12.06□□□□□ -0.48
PFDN6-202ENST00000374607 NQO2P16083 231 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 TAS2R31P59538 309 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 RND3P61587 244 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 TRIM16LQ309B1 348 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 TMED4Q7Z7H5 227 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 VKORC1L1Q8N0U8 176 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 RHOVQ96L33 236 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 HSPB9Q9BQS6 159 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 SLC25A21Q9BQT8 299 aaPredicted RBP12.06□□□□□ -0.48
PFDN6-202ENST00000374607 OR51J1Q9H342 316 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 PLEKHA2Q9HB19 425 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 SERTAD4Q9NUC0 356 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 GPR132Q9UNW8 380 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 KCNIP3Q9Y2W7 256 aa12.06□□□□□ -0.48
PFDN6-202ENST00000374607 PSMB11A5LHX3 300 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 OR2A4O95047 310 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 S1PR2O95136 353 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 IGLV2-23P01705 113 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 AKR1C4P17516 323 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 PROK1P58294 105 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 TMEM267Q0VDI3 215 aaPredicted RBP12.05□□□□□ -0.48
PFDN6-202ENST00000374607 TNXAQ16473 311 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
PFDN6-202ENST00000374607 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 NOL4LQ96MY1 436 aaPredicted RBP12.05□□□□□ -0.48
PFDN6-202ENST00000374607 OR2A7Q96R45 310 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 PHB2Q99623 299 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 TPSG1Q9NRR2 321 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 COMMD9Q9P000 198 aa12.05□□□□□ -0.48
PFDN6-202ENST00000374607 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 LINC01548A6NM66 108 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 H0Y980 276 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 FCN1O00602 326 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 B3GALNT1O75752 331 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 ATG12O94817 140 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 KRASP01116 189 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 RPA2P15927 270 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 CCR6P51684 374 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 BRWD1-AS2P59051 145 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 CX3CL1P78423 397 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 FXYD3Q14802 87 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 RBMS2Q15434 407 aaKnown RBP12.04□□□□□ -0.48
PFDN6-202ENST00000374607 SHISA2Q6UWI4 295 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 ZNF562Q6V9R5 426 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 STPG2Q8N412 459 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 C11orf44Q8N8P7 122 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 OR5AU1Q8NGC0 362 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 OR4X2Q8NGF9 303 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 GRPEL2Q8TAA5 225 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 WFDC12Q8WWY7 111 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 ARPC1AQ92747 370 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 RTBDNQ9BSG5 229 aaPredicted RBP12.04□□□□□ -0.48
PFDN6-202ENST00000374607 ZNF747Q9BV97 191 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 C5orf66Q9H5L9 145 aa12.04□□□□□ -0.48
PFDN6-202ENST00000374607 MARCH11A6NNE9 402 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 ATP6V0E1O15342 81 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 LYRM1O43325 122 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 FBXO24O75426 580 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 KBTBD11O94819 623 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 ANXA3P12429 323 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 G6PCP35575 357 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 ECSCRQ19T08 205 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 SP6Q3SY56 376 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 KHDC1LQ5JSQ8 128 aa12.03□□□□□ -0.48
PFDN6-202ENST00000374607 OR4A47Q6IF82 309 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms