RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 KLHDC1Q8N7A1 406 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 ZNF345Q14585 488 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 Q1RN00 199 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 ANAPC16Q96DE5 110 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 KBTBD11-OT1A0A1B0GTJ5 212 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 CFDP00746 253 aaPredicted RBP12.47□□□□□ -0.41
NDC1-201ENST00000371429 GNLYP22749 145 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 NPPCP23582 126 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 COX19Q49B96 90 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 MIC13Q5XKP0 118 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 MRPL54Q6P161 138 aaKnown RBP12.47□□□□□ -0.41
NDC1-201ENST00000371429 FAM90A1Q86YD7 464 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 OR13A1Q8NGR1 328 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 WBP1Q96G27 269 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 PRSS1P07477 247 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
NDC1-201ENST00000371429 OR2D3Q8NGH3 330 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 FBXL15Q9H469 300 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 KCNAB3O43448 404 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 UCP3P55916 312 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 RELQ04864 619 aaPredicted RBP12.47□□□□□ -0.41
NDC1-201ENST00000371429 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 IL22RA2Q969J5 263 aa12.47□□□□□ -0.41
NDC1-201ENST00000371429 IGKV1D-33P01593 117 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 IGKV1-33P01594 117 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 THBDP07204 575 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 CD300CQ08708 224 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 RAX2Q96IS3 184 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 C5orf66Q9H5L9 145 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.41
NDC1-201ENST00000371429 ZFHX2Q9C0A1 2572 aaPredicted RBP12.46□□□□□ -0.41
NDC1-201ENST00000371429 PQLC2Q6ZP29 291 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 RTN4RL2Q86UN3 420 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 H1FOOQ8IZA3 346 aaPredicted RBP12.46□□□□□ -0.41
NDC1-201ENST00000371429 C9orf62Q8N4C0 152 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 OSR1Q8TAX0 266 aaPredicted RBP12.46□□□□□ -0.41
NDC1-201ENST00000371429 AURKAIP1Q9NWT8 199 aaPredicted RBP12.46□□□□□ -0.41
NDC1-201ENST00000371429 IL36RNQ9UBH0 155 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 TUBD1Q9UJT1 453 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 IL18BPO95998 194 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 HIST1H1BP16401 226 aaKnown RBP12.46□□□□□ -0.41
NDC1-201ENST00000371429 DPPA3Q6W0C5 159 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 SLC16A13Q7RTY0 426 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 BMPERQ8N8U9 685 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 CLRN3Q8NCR9 226 aa12.46□□□□□ -0.41
NDC1-201ENST00000371429 IGHV3-48P01763 117 aa12.46□□□□□ -0.42
NDC1-201ENST00000371429 RPL7P18124 248 aaKnown RBP12.46□□□□□ -0.42
NDC1-201ENST00000371429 NEUROG3Q9Y4Z2 214 aa12.46□□□□□ -0.42
NDC1-201ENST00000371429 LINC00312Q9Y6C7 94 aa12.46□□□□□ -0.42
NDC1-201ENST00000371429 MUC6Q6W4X9 2439 aa12.46□□□□□ -0.42
NDC1-201ENST00000371429 LYNX1G3V0Z9 82 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 LYNX1P0DP58 116 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 SRSF6Q13247 344 aaKnown RBP12.45□□□□□ -0.42
NDC1-201ENST00000371429 TAF15Q92804 592 aaKnown RBP eCLIP12.45□□□□□ -0.42
NDC1-201ENST00000371429 DNAJC4Q9NNZ3 241 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 PKDREJQ9NTG1 2253 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 A0A1B0GTI1 187 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 PGPA6NDG6 321 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 ZNF146Q15072 292 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 LAIR2Q6ISS4 152 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 C19orf35Q6ZS72 473 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 TEX50A0A1B0GTY4 177 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 ZNF253O75346 499 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 Q0VFX4 171 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 PEAR1Q5VY43 1037 aaPredicted RBP12.45□□□□□ -0.42
NDC1-201ENST00000371429 MELTFP08582 738 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 AWAT1Q58HT5 328 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 RGP1Q92546 391 aaPredicted RBP12.45□□□□□ -0.42
NDC1-201ENST00000371429 DUX5Q96PT3 197 aa12.45□□□□□ -0.42
NDC1-201ENST00000371429 RAB9AP51151 201 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 OR4X2Q8NGF9 303 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 HKR1P10072 659 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 ZIC4Q8N9L1 334 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 FAM131CQ96AQ9 280 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 IGKV3D-15A0A087WSY6 115 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 TMEM218A2RU14 115 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 OR10C1Q96KK4 312 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 PARD6AQ9NPB6 346 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 DLK1P80370 383 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 IFITM3Q01628 133 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 ZNF880Q6PDB4 577 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 WDFY1Q8IWB7 410 aa12.44□□□□□ -0.42
NDC1-201ENST00000371429 LYRM2Q9NU23 88 aaPredicted RBP12.44□□□□□ -0.42
NDC1-201ENST00000371429 A0A0G2JLM5 398 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 CRISP2P16562 243 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 CCL3L1P16619 93 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 KIR2DL2P43627 348 aaPredicted RBP12.43□□□□□ -0.42
NDC1-201ENST00000371429 RNF212Q495C1 297 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 OR51G1Q8NGK1 321 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 PLSCR4Q9NRQ2 329 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 B4DEV8 164 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 TOMM20LQ6UXN7 152 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 PQLC2LA1A4F0 135 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.43□□□□□ -0.42
NDC1-201ENST00000371429 ZNF646O15015 1829 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms