RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
SNX27-202ENST00000368841 IGHV3-11P01762 117 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 TRBV20OR9-2A0A075B6H5 130 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 FABP2P12104 132 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 DUX3Q96PT4 197 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 C8orf82Q6P1X6 216 aaPredicted RBP15.51■□□□□ 0.07
SNX27-202ENST00000368841 FAM159AQ6UWV7 190 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 KCNK17Q96T54 332 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 QSER1Q2KHR3 1735 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 COX6CP09669 75 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 RFPL3SP0C7P2 107 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 NPPCP23582 126 aa15.51■□□□□ 0.07
SNX27-202ENST00000368841 MARS2Q96GW9 593 aaKnown RBP15.51■□□□□ 0.07
SNX27-202ENST00000368841 SAP25Q8TEE9 199 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 SMAGPQ0VAQ4 97 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 TMEM170BQ5T4T1 132 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 LHX2P50458 406 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 TNFRSF9Q07011 255 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 MMD2Q8IY49 270 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 LHFPL5Q8TAF8 219 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 CLEC7AQ9BXN2 247 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 A0A0G2JMM0 328 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 A0A1W2PPB8 328 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 A0A1W2PRS3 328 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 KIR3DP1A8MWS1 328 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 CD24P25063 80 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 SNRPD3P62318 126 aaKnown RBP15.5■□□□□ 0.07
SNX27-202ENST00000368841 C11orf68Q9H3H3 251 aaKnown RBP15.5■□□□□ 0.07
SNX27-202ENST00000368841 FAM206AQ9NX38 181 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 PILRAQ9UKJ1 303 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 SCN8AQ9UQD0 1980 aa15.5■□□□□ 0.07
SNX27-202ENST00000368841 TMEM238LA0A1B0GVL6 79 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 A6NJY4 79 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 CLEC19AQ6UXS0 136 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 DDA1Q9BW61 102 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 CDKN1AP38936 164 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 FBXL15Q9H469 300 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 SIAH2O43255 324 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 PGPEP1Q9NXJ5 209 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 STPG3Q8N7X2 389 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 OR1P1Q8NH06 330 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 RGPD3A6NKT7 1758 aaPredicted RBP15.49■□□□□ 0.07
SNX27-202ENST00000368841 A0A1B0GV72 72 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 ICAM4Q14773 271 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 C1orf53Q5VUE5 145 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 M0QZK8 103 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 GGCTO75223 188 aaKnown RBP15.49■□□□□ 0.07
SNX27-202ENST00000368841 SRD5A1P18405 259 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 P2RY6Q15077 328 aa15.49■□□□□ 0.07
SNX27-202ENST00000368841 CEACAM4O75871 244 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 OR10S1Q8NGN2 331 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 COL11A1P12107 1806 aaPredicted RBP15.48■□□□□ 0.07
SNX27-202ENST00000368841 TRAV8-6A0A0B4J262 113 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 TRBV5-3A0A0A0MS03 114 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 A0A1W2PQM1 296 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 NPIPB11E5RHQ5 1161 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 HLA-DQB1P01920 261 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 TMEM136Q6ZRR5 245 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 SCARF2Q96GP6 870 aaPredicted RBP15.48■□□□□ 0.07
SNX27-202ENST00000368841 YAE1D1Q9NRH1 226 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 CA11O75493 328 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 LAMB2P55268 1798 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 LIMS1P48059 325 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 CYB5R2Q6BCY4 276 aa15.48■□□□□ 0.07
SNX27-202ENST00000368841 NDUFA3O95167 84 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 SAA1P0DJI8 122 aaPredicted RBP15.47■□□□□ 0.07
SNX27-202ENST00000368841 FOXA3P55318 350 aaPredicted RBP15.47■□□□□ 0.07
SNX27-202ENST00000368841 ZNF506Q5JVG8 444 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 OR51G1Q8NGK1 321 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 NSUN5P1Q3KNT7 163 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 GALNT14Q96FL9 552 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 PDCD11Q14690 1871 aaKnown RBP15.47■□□□□ 0.07
SNX27-202ENST00000368841 C1orf174Q8IYL3 243 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 NRIP2Q9BQI9 281 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 BSPH1Q075Z2 132 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 TFF3Q07654 80 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 COX19Q49B96 90 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 RAMP1O60894 148 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 LIPFP07098 398 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 WNT10AQ9GZT5 417 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 C5orf66Q9H5L9 145 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 MDC1Q14676 2089 aaKnown RBP15.47■□□□□ 0.07
SNX27-202ENST00000368841 GPR183P32249 361 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 AQP3Q92482 292 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 TMEM45BQ96B21 275 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 KCNE5Q9UJ90 142 aa15.47■□□□□ 0.07
SNX27-202ENST00000368841 IGLV1-36A0A0B4J1U3 117 aa15.46■□□□□ 0.07
SNX27-202ENST00000368841 CIRBPQ14011 172 aaKnown RBP15.46■□□□□ 0.07
SNX27-202ENST00000368841 DLEC1Q9Y238 1755 aa15.46■□□□□ 0.07
SNX27-202ENST00000368841 GFI1BQ5VTD9 330 aa15.46■□□□□ 0.07
SNX27-202ENST00000368841 KLF4O43474 513 aa15.46■□□□□ 0.07
SNX27-202ENST00000368841 WDR82Q6UXN9 313 aa15.46■□□□□ 0.07
SNX27-202ENST00000368841 CBLN4Q9NTU7 201 aa15.46■□□□□ 0.07
SNX27-202ENST00000368841 FGF5P12034 268 aa15.46■□□□□ 0.06
SNX27-202ENST00000368841 IFITM3Q01628 133 aa15.46■□□□□ 0.06
SNX27-202ENST00000368841 MEF2BQ02080 365 aaPredicted RBP15.46■□□□□ 0.06
SNX27-202ENST00000368841 LINC01587Q99440 93 aa15.46■□□□□ 0.06
SNX27-202ENST00000368841 CELA3BP08861 270 aa15.46■□□□□ 0.06
SNX27-202ENST00000368841 KIF13BQ9NQT8 1826 aa15.45■□□□□ 0.06
SNX27-202ENST00000368841 NABP2Q9BQ15 211 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms