RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 LAMTOR1Q6IAA8 161 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 MOB1BQ7L9L4 216 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 C6orf201Q7Z4U5 140 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 SLC25A42Q86VD7 318 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.58□□□□□ -0.72
VAMP4-202ENST00000367740 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 C5orf30Q96GV9 206 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 GABARAPL3Q9BY60 117 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 FAM107BQ9H098 131 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 GABARAPL1Q9H0R8 117 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 ZFAND3Q9H8U3 227 aa10.58□□□□□ -0.72
VAMP4-202ENST00000367740 MFSD2BA6NFX1 497 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 NPIPB5A8MRT5 1133 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 G3V2T6 193 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 IFNA10P01566 189 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 PSMB6P28072 239 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 SNRPGP62308 76 aaKnown RBP10.57□□□□□ -0.72
VAMP4-202ENST00000367740 HLA-DRB3P79483 266 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 CBX3Q13185 183 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 SPATA24Q86W54 205 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 CHMP1AQ9HD42 196 aaPredicted RBP10.57□□□□□ -0.72
VAMP4-202ENST00000367740 IMPAD1Q9NX62 359 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 ERVK13-1Q9NX77 482 aa10.57□□□□□ -0.72
VAMP4-202ENST00000367740 ELOA3CA0A087WX78 387 aaPredicted RBP10.56□□□□□ -0.72
VAMP4-202ENST00000367740 TCRBV3S1A0A5B6 114 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 EPM2AB3EWF7 344 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 DYNC1I1O14576 645 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 CLEC3BP05452 202 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 TAGLNQ01995 201 aaKnown RBP10.56□□□□□ -0.72
VAMP4-202ENST00000367740 RTL8BQ17RB0 113 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 UBE2DNLQ8IWF7 75 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 TMEM190Q8WZ59 177 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 NEDD4LQ96PU5 975 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 MYCBPQ99417 103 aaPredicted RBP10.56□□□□□ -0.72
VAMP4-202ENST00000367740 ZNF436Q9C0F3 470 aaPredicted RBP10.56□□□□□ -0.72
VAMP4-202ENST00000367740 CELA1Q9UNI1 258 aa10.56□□□□□ -0.72
VAMP4-202ENST00000367740 IGKV1-6A0A0C4DH72 117 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 ACTL6BO94805 426 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 CTSDP07339 412 aaPredicted RBP10.55□□□□□ -0.72
VAMP4-202ENST00000367740 SAA1P0DJI8 122 aaPredicted RBP10.55□□□□□ -0.72
VAMP4-202ENST00000367740 GPR183P32249 361 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 KLK9Q2XQG4 91 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 ZNF767PQ75MW2 155 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 THTPAQ9BU02 230 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 OR2D2Q9H210 308 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
VAMP4-202ENST00000367740 SDHAF2Q9NX18 166 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 KLK9Q9UKQ9 250 aa10.55□□□□□ -0.72
VAMP4-202ENST00000367740 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 TRBV7-1A0A0A6YYK4 115 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 A0A1B0GW64 132 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 C15orf61A6NNL5 157 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 CRYZL1O95825 349 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 GSTT2P0CG29 244 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 GSTT2BP0CG30 244 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 CDK10Q15131 360 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 C12orf74Q32Q52 190 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 MMD2Q8IY49 270 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 CENPSQ8N2Z9 138 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 TRUB1Q8WWH5 349 aaKnown RBP10.54□□□□□ -0.72
VAMP4-202ENST00000367740 FYTTD1Q96QD9 318 aaKnown RBP10.54□□□□□ -0.72
VAMP4-202ENST00000367740 HDHD3Q9BSH5 251 aaPredicted RBP10.54□□□□□ -0.72
VAMP4-202ENST00000367740 RDH8Q9NYR8 311 aa10.54□□□□□ -0.72
VAMP4-202ENST00000367740 TRBV5-5A0A0J9YX44 114 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 E7EUB6 86 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 CREBL2O60519 120 aaPredicted RBP10.53□□□□□ -0.72
VAMP4-202ENST00000367740 IFNA21P01568 189 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 IFNA17P01571 189 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 IL6RP08887 468 aaPredicted RBP10.53□□□□□ -0.72
VAMP4-202ENST00000367740 RRASP10301 218 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 MIFP14174 115 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 RPA2P15927 270 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 FLOT2Q14254 428 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 MEDAGQ5VYS4 303 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 RPL22L1Q6P5R6 122 aaKnown RBP10.53□□□□□ -0.72
VAMP4-202ENST00000367740 CKLFQ9UBR5 152 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 AASSQ9UDR5 926 aa10.53□□□□□ -0.72
VAMP4-202ENST00000367740 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
VAMP4-202ENST00000367740 DPPA5A6NC42 116 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 CRYGCP07315 174 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 AREGP15514 252 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 ATP6AP1Q15904 470 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 PLET1Q6UQ28 207 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 ZNF502Q8TBZ5 544 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 NICN1Q9BSH3 213 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 SLC2A9Q9NRM0 540 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 ETV7Q9Y603 341 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 X6R8D5 127 aa10.52□□□□□ -0.73
VAMP4-202ENST00000367740 IGLV11-55A0A075B6I3 123 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 ZNF705EA8MWA4 302 aaPredicted RBP10.51□□□□□ -0.73
VAMP4-202ENST00000367740 DCTN3O75935 186 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 GIG44P09565 113 aaPredicted RBP10.51□□□□□ -0.73
VAMP4-202ENST00000367740 HTR2CP28335 458 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 TFPI2P48307 235 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 CCDC58Q4VC31 144 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 OR10K2Q6IF99 312 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 ZNF367Q7RTV3 350 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 CDH26Q8IXH8 852 aa10.51□□□□□ -0.73
VAMP4-202ENST00000367740 OSR1Q8TAX0 266 aaPredicted RBP10.51□□□□□ -0.73
VAMP4-202ENST00000367740 CXorf58Q96LI9 332 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms