RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZNF345Q14585 488 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 ABLIM2Q6H8Q1 611 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 IL22RA2Q969J5 263 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 TMEM56-RWDD3S4R434 201 aa15.77■□□□□ 0.11
CLIP2-202ENST00000361545 PDCD11Q14690 1871 aaKnown RBP15.76■□□□□ 0.11
CLIP2-202ENST00000361545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.76■□□□□ 0.11
CLIP2-202ENST00000361545 NPIPB11E5RHQ5 1161 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 PF4P02776 101 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 BPIFA4PQ86YQ2 179 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 OR4C5Q8NGB2 326 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 ANKRD36A6QL64 1941 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 J3QR89 54 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 EIF3GO75821 320 aaKnown RBP eCLIP15.76■□□□□ 0.11
CLIP2-202ENST00000361545 MELTFP08582 738 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 TBR1Q16650 682 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 NRN1LQ496H8 165 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 MMP9P14780 707 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 PRB3Q04118 309 aaPredicted RBP15.76■□□□□ 0.11
CLIP2-202ENST00000361545 COTL1Q14019 142 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 IGHV3OR16-13A0A075B7E8 117 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 IGHV3-74A0A0B4J1X5 117 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 STPG3Q8N7X2 389 aa15.76■□□□□ 0.11
CLIP2-202ENST00000361545 REPIN1Q9BWE0 567 aaKnown RBP15.76■□□□□ 0.11
CLIP2-202ENST00000361545 SPTBN1Q01082 2364 aaKnown RBP15.75■□□□□ 0.11
CLIP2-202ENST00000361545 H3BTX0 84 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 M0R2Z0 102 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 MPDU1O75352 247 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 HIST3H3Q16695 136 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 LAMTOR1Q6IAA8 161 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 ARHGEF17Q96PE2 2063 aaPredicted RBP15.75■□□□□ 0.11
CLIP2-202ENST00000361545 RPL7P18124 248 aaKnown RBP15.75■□□□□ 0.11
CLIP2-202ENST00000361545 IER3P46695 156 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 MRPL37Q9BZE1 423 aaKnown RBP15.75■□□□□ 0.11
CLIP2-202ENST00000361545 PGPA6NDG6 321 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 CDK2AP1O14519 115 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 IQCJQ1A5X6 159 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 NRIP2Q9BQI9 281 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 DPM3Q9P2X0 92 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 OR13A1Q8NGR1 328 aa15.75■□□□□ 0.11
CLIP2-202ENST00000361545 NBASA2RRP1 2371 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 LINC00271P0C7V0 271 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 TMEM30BQ3MIR4 351 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 C7orf77A4D0Y5 90 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 RRN3P1Q2M238 152 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 YAE1D1Q9NRH1 226 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 H1FOOQ8IZA3 346 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-202ENST00000361545 POC1AQ8NBT0 407 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 TAF15Q92804 592 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLIP2-202ENST00000361545 FBXL15Q9H469 300 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 S4R3C0 116 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 CXCL2P19875 107 aa15.74■□□□□ 0.11
CLIP2-202ENST00000361545 RPL29P47914 159 aaKnown RBP15.74■□□□□ 0.11
CLIP2-202ENST00000361545 SCGB1C2P0DMR2 95 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 LYNX1G3V0Z9 82 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 IGHV3-23P01764 117 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 LYNX1P0DP58 116 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 CBLN2Q8IUK8 224 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 DDB2Q92466 427 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 IGKV1D-33P01593 117 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 IGKV1-33P01594 117 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 FOXF2Q12947 444 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 HLA-DRB5Q30154 266 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 FAM74A3Q4VXF1 159 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 LHFPL5Q8TAF8 219 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 TUBD1Q9UJT1 453 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 NDUFB4O95168 129 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 BCL2P10415 239 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 C21orf62-AS1Q17RA5 79 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 NPIPB3Q92617 1050 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 NPDC1Q9NQX5 325 aaPredicted RBP15.73■□□□□ 0.11
CLIP2-202ENST00000361545 E9PLN8 166 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 VKORC1Q9BQB6 163 aa15.73■□□□□ 0.11
CLIP2-202ENST00000361545 LYRM2Q9NU23 88 aaPredicted RBP15.73■□□□□ 0.11
CLIP2-202ENST00000361545 SNURFLB1AK76 121 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 TRGV3P03979 118 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 DPPA3Q6W0C5 159 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 TRAV34A0A0B4J273 112 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 PTBP3O95758 552 aaKnown RBP15.72■□□□□ 0.11
CLIP2-202ENST00000361545 TRAV30A0A087WSZ9 112 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 SHISA3A0PJX4 238 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 TMEM189A5PLL7 270 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 PROB1E7EW31 1015 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 TWIST1Q15672 202 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 C19orf35Q6ZS72 473 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 EEF1AKMT3Q96AZ1 226 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 TP53RKQ96S44 253 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 SRSF6Q13247 344 aaKnown RBP15.72■□□□□ 0.11
CLIP2-202ENST00000361545 DNAJC4Q9NNZ3 241 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 SEMA5BQ9P283 1151 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 FUT9Q9Y231 359 aa15.72■□□□□ 0.11
CLIP2-202ENST00000361545 IQCF6A8MYZ5 107 aa15.71■□□□□ 0.11
CLIP2-202ENST00000361545 FAM90A26D6RGX4 464 aa15.71■□□□□ 0.11
CLIP2-202ENST00000361545 AP4M1O00189 453 aa15.71■□□□□ 0.11
CLIP2-202ENST00000361545 COMPP49747 757 aaPredicted RBP15.71■□□□□ 0.11
CLIP2-202ENST00000361545 CHAC2Q8WUX2 184 aa15.71■□□□□ 0.11
CLIP2-202ENST00000361545 DUX5Q96PT3 197 aa15.71■□□□□ 0.11
CLIP2-202ENST00000361545 MRPL13Q9BYD1 178 aaKnown RBP15.71■□□□□ 0.11
CLIP2-202ENST00000361545 HKR1P10072 659 aa15.71■□□□□ 0.11
CLIP2-202ENST00000361545 TMEM97Q5BJF2 176 aa15.71■□□□□ 0.11
CLIP2-202ENST00000361545 NCMAPQ5T1S8 102 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms