RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 OR52L2PQ8NGH6 319 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 OR10V1Q8NGI7 309 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 OR13D1Q8NGV5 346 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 KCNJ16Q9NPI9 418 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 PITPNC1Q9UKF7 332 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 TRBV6-7A0A0A0MS04 114 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 TUSC2O75896 110 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 UQCRFS1P47985 274 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 FGF8P55075 233 aaPredicted RBP10.54□□□□□ -0.72
GGPS1-202ENST00000358966 TESK1Q15569 626 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 IZUMO4Q1ZYL8 232 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 C1orf194Q5T5A4 169 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 Q6ZS49 121 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 TMEM183AQ8IXX5 376 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 MSI2Q96DH6 328 aaKnown RBP10.54□□□□□ -0.72
GGPS1-202ENST00000358966 RNF126Q9BV68 326 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 RAB18Q9NP72 206 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 PARP11Q9NR21 331 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 PPP1R3CQ9UQK1 317 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 WIPI2Q9Y4P8 454 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-202ENST00000358966 MPPED1O15442 326 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 TSPAN15O95858 294 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 KCNS2Q9ULS6 477 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 RBM7Q9Y580 266 aaKnown RBP10.53□□□□□ -0.72
GGPS1-202ENST00000358966 CELSR1Q9NYQ6 3014 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 C3orf85A0A1B0GTC6 90 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 M0QZ24 198 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 IGLV2-14P01704 120 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 TUBG1P23258 451 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 PSMB6P28072 239 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 CHRNB4P30926 498 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 PPP1CCP36873 323 aaKnown RBP10.53□□□□□ -0.72
GGPS1-202ENST00000358966 TAGLN2P37802 199 aaKnown RBP10.53□□□□□ -0.72
GGPS1-202ENST00000358966 TMEM268Q5VZI3 342 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 H1FOOQ8IZA3 346 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-202ENST00000358966 ST6GALNAC3Q8NDV1 305 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 RNF2Q99496 336 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 PRORYQ9H606 182 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 TUBG2Q9NRH3 451 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 OR2W1Q9Y3N9 320 aa10.53□□□□□ -0.72
GGPS1-202ENST00000358966 SHISA9B4DS77 424 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 SNCAP37840 140 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 SULT1A2P50226 295 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 EDDM3BP56851 147 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 SELENOVP59797 346 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 FAM90A1Q86YD7 464 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 PRR7Q8TB68 274 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 SCRT1Q9BWW7 348 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 MBNL3Q9NUK0 354 aaKnown RBP10.52□□□□□ -0.72
GGPS1-202ENST00000358966 DOCK11Q5JSL3 2073 aa10.52□□□□□ -0.72
GGPS1-202ENST00000358966 TRBV6-6A0A0A6YYG2 114 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 KIR2DL5BA0A0G2JN68 375 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 KIR2DL5BA0A0G2JPC4 375 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 TMEM30CPA0ZSE6 113 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 E7EQL1 145 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 ZNF737O75373 536 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 HBZP02008 142 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 GYPAP02724 150 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 ZNF16P17020 682 aaPredicted RBP10.52□□□□□ -0.73
GGPS1-202ENST00000358966 ECI1P42126 302 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 UBE2KP61086 200 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
GGPS1-202ENST00000358966 KIR2DL5AQ8N109 375 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 ZNF808Q8N4W9 903 aaPredicted RBP10.52□□□□□ -0.73
GGPS1-202ENST00000358966 CORO2AQ92828 525 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 LSM5Q9Y4Y9 91 aaKnown RBP10.52□□□□□ -0.73
GGPS1-202ENST00000358966 CELSR2Q9HCU4 2923 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 DSCAML1Q8TD84 2053 aa10.52□□□□□ -0.73
GGPS1-202ENST00000358966 SPG11Q96JI7 2443 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 LMO1P25800 156 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 MDH2P40926 338 aaKnown RBP10.51□□□□□ -0.73
GGPS1-202ENST00000358966 UCP3P55916 312 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 TLE1Q04724 770 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 C3orf36Q3SXR2 165 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 MIDNQ504T8 468 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 COL5A1-AS1Q5SY13 56 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 FAM216BQ8N7L0 139 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 NUP37Q8NFH4 326 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 CABLES2Q9BTV7 478 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 POLR3KQ9Y2Y1 108 aaPredicted RBP10.51□□□□□ -0.73
GGPS1-202ENST00000358966 ZNF462Q96JM2 2506 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 LOC105371242A0A075B767 164 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 IQCJQ1A5X6 159 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 RPL7L1Q6DKI1 246 aaKnown RBP10.51□□□□□ -0.73
GGPS1-202ENST00000358966 LIAT1Q6ZQX7 453 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 LEAP2Q969E1 77 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 C5orf30Q96GV9 206 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 C2orf50Q96LR7 162 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 CCL13Q99616 98 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 NMES1Q9C002 83 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 SLC35B3Q9H1N7 401 aa10.51□□□□□ -0.73
GGPS1-202ENST00000358966 UBE2J1Q9Y385 318 aaPredicted RBP10.51□□□□□ -0.73
GGPS1-202ENST00000358966 PGLYRP1O75594 196 aaPredicted RBP10.5□□□□□ -0.73
GGPS1-202ENST00000358966 ASCL1P50553 236 aa10.5□□□□□ -0.73
GGPS1-202ENST00000358966 ZNF616Q08AN1 781 aa10.5□□□□□ -0.73
GGPS1-202ENST00000358966 C1orf174Q8IYL3 243 aa10.5□□□□□ -0.73
GGPS1-202ENST00000358966 HPRT1P00492 218 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms