RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 HIPK2Q9H2X6 1198 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 RBPJQ06330 500 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 RSPO1Q2MKA7 263 aaPredicted RBP9.69□□□□□ -0.86
CNOT3-202ENST00000358389 SMRP1Q8NCR6 262 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 MRGPRDQ8TDS7 321 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 OR5P3Q8WZ94 311 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 AP1S3Q96PC3 154 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 CST9LQ9H4G1 147 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 HSPB7Q9UBY9 170 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 IGHV2OR16-5A0A0B4J2B6 119 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 IGHV3-13P01766 116 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 IGHV3-7P01780 117 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 SUMO3P55854 103 aaPredicted RBP9.69□□□□□ -0.86
CNOT3-202ENST00000358389 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
CNOT3-202ENST00000358389 C6orf15Q6UXA7 325 aaPredicted RBP9.69□□□□□ -0.86
CNOT3-202ENST00000358389 C1orf210Q8IVY1 113 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 SLC24A4Q8NFF2 622 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 OR4A16Q8NH70 328 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 VWCEQ96DN2 955 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 HS3ST6Q96QI5 342 aa9.69□□□□□ -0.86
CNOT3-202ENST00000358389 LIN7CQ9NUP9 197 aaKnown RBP9.69□□□□□ -0.86
CNOT3-202ENST00000358389 YPEL1O60688 119 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 WNT2P09544 360 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 OCIAD2Q56VL3 154 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 ZNF295-AS1Q8N0V1 137 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 YPEL2Q96QA6 119 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 NPCDR1Q9BY65 106 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 ATP23Q9Y6H3 246 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 IGKV3D-11A0A0A0MRZ8 115 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 ZG16O60844 167 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 IGKV1-5P01602 117 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 GFRA1P56159 465 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 PSG4Q00888 419 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 PRAMEF5Q5TYX0 476 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 PRAMEF6Q5VXH4 476 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 CENPVQ7Z7K6 275 aaPredicted RBP9.68□□□□□ -0.86
CNOT3-202ENST00000358389 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 IGKV1-6A0A0C4DH72 117 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 TIMP3P35625 211 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 KCNMB1Q16558 191 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 H2BFWTQ7Z2G1 175 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 TMEM144Q7Z5S9 345 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 S100A7AQ86SG5 101 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 IL36BQ9NZH7 164 aa9.68□□□□□ -0.86
CNOT3-202ENST00000358389 M0R2Z0 102 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 ENSAO43768 121 aaKnown RBP9.67□□□□□ -0.86
CNOT3-202ENST00000358389 NUDT3O95989 172 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 PRDX4Q13162 271 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 OR1L1Q8NH94 360 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 GSX1Q9H4S2 264 aaPredicted RBP9.67□□□□□ -0.86
CNOT3-202ENST00000358389 LOXL2Q9Y4K0 774 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 KLRC4-KLRK1H3BQV0 150 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 TNFSF15O95150 251 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 YPEL3P61236 119 aaPredicted RBP9.67□□□□□ -0.86
CNOT3-202ENST00000358389 Q5PR19 223 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 NIT1Q86X76 327 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 TMEM178AQ8NBL3 297 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 RCHY1Q96PM5 261 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 MEGF9Q9H1U4 602 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
CNOT3-202ENST00000358389 IL19Q9UHD0 177 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 USF3Q68DE3 2245 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 K7EP13 123 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 S1PR2O95136 353 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 APOA2P02652 100 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 CTSSP25774 331 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 PRR31Q5SQ13 230 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 DHRS13Q6UX07 377 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 ANKRD37Q7Z713 158 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 SSMEM1Q8WWF3 244 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 CHD7Q9P2D1 2997 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 ZNF324O75467 553 aaPredicted RBP9.67□□□□□ -0.86
CNOT3-202ENST00000358389 CCL4P13236 92 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 RPL31P62899 125 aaKnown RBP9.67□□□□□ -0.86
CNOT3-202ENST00000358389 MPV17L2Q567V2 206 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 C1orf185Q5T7R7 199 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 H1FXQ92522 213 aaKnown RBP9.67□□□□□ -0.86
CNOT3-202ENST00000358389 KCNS1Q96KK3 526 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 KCNIP2Q9NS61 270 aa9.67□□□□□ -0.86
CNOT3-202ENST00000358389 ADAMTS9Q9P2N4 1935 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 HSBP1L1C9JCN9 74 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 IGKV1-39P01597 117 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 IGKV1D-39P04432 117 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 FKBP2P26885 142 aaKnown RBP9.66□□□□□ -0.86
CNOT3-202ENST00000358389 ARL3P36405 182 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 LINC00310P59036 64 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 TBC1D28Q2M2D7 210 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 ALKBH6Q3KRA9 238 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 DYNLRB1Q9NP97 96 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 SPEGQ15772 3267 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 IGHV2-70DA0A0C4DH43 119 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 DOLPP1Q86YN1 238 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 OR5A2Q8NGI9 324 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 DEPPQ9NTK1 212 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 A0A1W2PS18 150 aa9.66□□□□□ -0.86
CNOT3-202ENST00000358389 MLNRO43193 412 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms