RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 TSSC4Q9Y5U2 329 aaPredicted RBP7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 IGKV3D-11A0A0A0MRZ8 115 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 TRBV7-9A0A0J9YWB2 115 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 TEX48A0A1B0GUV7 120 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 PGPEP1LA6NFU8 196 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 KLK10O43240 276 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 PLP1P60201 277 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 MEF2CQ06413 473 aaPredicted RBP7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 IL11RAQ14626 422 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 TMEM249Q2WGJ8 235 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 LIAT1Q6ZQX7 453 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 SPATA12Q7Z6I5 190 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 ANKRD37Q7Z713 158 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 LRTM2Q8N967 370 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 LRRC75AQ8NAA5 344 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 ZNF114Q8NC26 417 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 GPER1Q99527 375 aa7.86□□□□□ -1.15
SMARCAL1-202ENST00000358207 GAGE12HA6NDE8 117 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 TMEM250H0YL14 139 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 HMGB3O15347 200 aaKnown RBP7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 CEACAM4O75871 244 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 S1PR2O95136 353 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 IGKV3-11P04433 115 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 CA7P43166 264 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 TAS2R46P59540 309 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 FMODQ06828 376 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 ZNF141Q15928 474 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 RNFT1Q5M7Z0 435 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 BLNKQ8WV28 456 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 NAA38Q9BRA0 125 aaKnown RBP7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 C19orf24Q9BVV8 132 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 HINT2Q9BX68 163 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 PLEK2Q9NYT0 353 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 PSG8Q9UQ74 426 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 EMC9Q9Y3B6 208 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 TMEM14AQ9Y6G1 99 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 SRSF10O75494 262 aaKnown RBP7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 EGR1P18146 543 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 CD1BP29016 333 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 CTXN1P60606 82 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 PHLDA2Q53GA4 152 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 ATP1A1-AS1Q5TC04 95 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 ZNF841Q6ZN19 808 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 OR10P1Q8NGE3 313 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 OR4F5Q8NH21 305 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 ADAT3Q96EY9 351 aaPredicted RBP7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 GPX7Q96SL4 187 aaPredicted RBP7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 FAM110AQ9BQ89 295 aa7.85□□□□□ -1.15
SMARCAL1-202ENST00000358207 C7orf71A4D174 169 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 C21orf140B9A014 251 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 C11orf98E9PRG8 122 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 H3BML4 177 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 ZNF324O75467 553 aaPredicted RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 NXPH3O95157 252 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 NRASP01111 189 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 KRASP01116 189 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 SMIM17P0DL12 118 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 IGLV3-21P80748 117 aaPredicted RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 SRSF6Q13247 344 aaKnown RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 GLIPR1L1Q6UWM5 242 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 SLC22A24Q8N4F4 322 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 OR10G3Q8NGC4 313 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 MRAP2Q96G30 205 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 KCNS1Q96KK3 526 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 DECR2Q9NUI1 292 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 ERRFI1Q9UJM3 462 aaPredicted RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 SPTAN1Q13813 2472 aaKnown RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 KIAA1324LA8MWY0 1029 aaPredicted RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 C17orf112F2Z3M2 114 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 CCNOP22674 350 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 HLA-DRB5Q30154 266 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 NRN1LQ496H8 165 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 FAM58AQ8N1B3 248 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 FER1L6-AS2Q96M78 137 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 ZNF286AQ9HBT8 521 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 FBLN5Q9UBX5 448 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 COL6A6A6NMZ7 2263 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 ADGRG4Q8IZF6 3080 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 PRR14LQ5THK1 2151 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 ROS1P08922 2347 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 SAA2-SAA4A0A096LPE2 208 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 A0A0G2JMM0 328 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 A0A1W2PPB8 328 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 A0A1W2PR80 420 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 KIR3DP1A8MWS1 328 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 VENTXO95231 258 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 IGKV1D-33P01593 117 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 IGKV1-33P01594 117 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 PGCP20142 388 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 MDH2P40926 338 aaKnown RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 PMCHL1Q16048 86 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 CD300EQ496F6 205 aaPredicted RBP7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 Q56UQ5 140 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 PERPQ96FX8 193 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 GP6Q9HCN6 339 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 SLC7A10Q9NS82 523 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 KLRF1Q9NZS2 232 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 SHANK1Q9Y566 2161 aa7.84□□□□□ -1.15
SMARCAL1-202ENST00000358207 UBR5O95071 2799 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms