RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AQP10Q96PS8 301 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 ARL6Q9H0F7 186 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 SLC35D1Q9NTN3 355 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 CACNG5Q9UF02 275 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 NSG2Q9Y328 171 aa14.68□□□□□ -0.06
SMARCD3-202ENST00000356800 MARCH11A6NNE9 402 aa14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 CRYZL1O95825 349 aa14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 IGKV1-16P04430 117 aa14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 EPHA1P21709 976 aa14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 CXorf66Q5JRM2 361 aaPredicted RBP14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 HIF1ANQ9NWT6 349 aa14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 DPM3Q9P2X0 92 aa14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 RCL1Q9Y2P8 373 aaKnown RBP14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 CCDC168Q8NDH2 2452 aa14.67□□□□□ -0.06
SMARCD3-202ENST00000356800 ITPR3Q14573 2671 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 TRAV20A0A0B4J274 112 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 NUP62P37198 522 aaPredicted RBP14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 UBE2E1P51965 193 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 ARHGDIBP52566 201 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 AP2S1P53680 142 aaPredicted RBP14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 TPTE2P1Q5T6R2 138 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 DHRS7BQ6IAN0 325 aaPredicted RBP14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 DMBX1Q8NFW5 382 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 RPEQ96AT9 228 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 R3HDM4Q96D70 268 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 AKAP9Q99996 3911 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 CELSR1Q9NYQ6 3014 aa14.66□□□□□ -0.06
SMARCD3-202ENST00000356800 IGHV1-3A0A0C4DH29 117 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 A0A1W2PPI3 338 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 FAM90A9PA6NNJ1 464 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 LEUTXA8MZ59 168 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 GAPDHP04406 335 aaKnown RBP14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 IGHV4-31P0DP07 118 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 NQO2P16083 231 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 RTL8BQ17RB0 113 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 MIDNQ504T8 468 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 H2BFWTQ7Z2G1 175 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 C17orf50Q8WW18 174 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 AJUBAQ96IF1 538 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 FOXC2Q99958 501 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 C11orf1Q9H5F2 150 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 SVEP1Q4LDE5 3571 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 CENPVL3A0A0U1RRI6 287 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 FAM90A26D6RGX4 464 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 KCNAB3O43448 404 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 TSC22D2O75157 780 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 APOA2P02652 100 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 RRASP10301 218 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 PAX6P26367 422 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 P2RY1P47900 373 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 POLR2GP62487 172 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 TMEM249Q2WGJ8 235 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 VKORC1L1Q8N0U8 176 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 DYNAPQ8N1N2 210 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 HILPDAQ9Y5L2 63 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 AUP1Q9Y679 476 aa14.65□□□□□ -0.06
SMARCD3-202ENST00000356800 IGHV3-72A0A0B4J1Y9 119 aa14.64□□□□□ -0.07
SMARCD3-202ENST00000356800 MSGN1A6NI15 193 aa14.64□□□□□ -0.07
SMARCD3-202ENST00000356800 HKR1P10072 659 aa14.64□□□□□ -0.07
SMARCD3-202ENST00000356800 PVALBP20472 110 aaPredicted RBP14.64□□□□□ -0.07
SMARCD3-202ENST00000356800 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.64□□□□□ -0.07
SMARCD3-202ENST00000356800 SRRM4A7MD48 611 aaKnown RBP14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 H7C2Y5 167 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 TXNL1O43396 289 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 RPL12P30050 165 aaKnown RBP14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 CEACAM3P40198 252 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 ERVK-16P61578 105 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 POU2AF1Q16633 256 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 AARDQ4LEZ3 155 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 MINOS1Q5TGZ0 78 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 GPR157Q5UAW9 335 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 TEX261Q6UWH6 196 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 SSX9Q7RTT3 188 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 MOB3BQ86TA1 216 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 PDPNQ86YL7 162 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 C7orf69Q9H7B7 122 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 WASHC3Q9Y3C0 194 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 MINOS1-NBL1R4GNA1 71 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 U3KQ87 197 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 CREBBPQ92793 2442 aa14.63□□□□□ -0.07
SMARCD3-202ENST00000356800 ZNF469Q96JG9 3925 aaPredicted RBP14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 KANTRA0A1W2PQU2 76 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 BCL2L11O43521 198 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 AVPP01185 164 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 GATA3P23771 443 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 TMEM177Q53S58 311 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 SLC51BQ86UW2 128 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 CIARTQ8N365 385 aaPredicted RBP14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 PIP4P2Q8N4L2 257 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 MAGT1Q9H0U3 335 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 HSPB7Q9UBY9 170 aa14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 TET2Q6N021 2002 aaPredicted RBP14.62□□□□□ -0.07
SMARCD3-202ENST00000356800 WRBO00258 174 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 TIMM23O14925 209 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 NPFFO15130 113 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 CHST1O43916 411 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 SSSCA1O60232 199 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 HRASP01112 189 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 TGFAP01135 160 aa14.61□□□□□ -0.07
SMARCD3-202ENST00000356800 OR9G9P0C7N8 305 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms