RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TCF24Q7RTU0 167 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 DTX4Q9Y2E6 619 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 TRGV2A0A075B6R0 118 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 GAS1P54826 345 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 OR13A1Q8NGR1 328 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 VGLL1Q99990 258 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 PGPEP1Q9NXJ5 209 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF638Q14966 1978 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 LNP1A1A4G5 178 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 FAM90A26D6RGX4 464 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 DXOO77932 396 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 ATP5IP56385 69 aaPredicted RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 SRSF4Q08170 494 aaKnown RBP4.75□□□□□ -1.65
PTPRD-202ENST00000356435 SPNS2Q8IVW8 549 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 FAM57AQ8TBR7 257 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 NEU1Q99519 415 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 KLF4O43474 513 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 PLAUP00749 431 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 SEC11BP0C7V7 166 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 PRO1933Q9H354 126 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM74BQ9NUR3 256 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 KCNE5Q9UJ90 142 aa4.75□□□□□ -1.65
PTPRD-202ENST00000356435 A0A0G2JK05 382 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 RECKO95980 971 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 DSCR9P59020 149 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 NUDT10Q8NFP7 164 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 LINC01587Q99440 93 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 MARCH11A6NNE9 402 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 FOXI3A8MTJ6 420 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 IL4P05112 153 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF688P0C7X2 276 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 PTGDSP41222 190 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF826PQ6ZT77 177 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 SSC4DQ8WTU2 575 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 SEMA5BQ9P283 1151 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 KLK13Q9UKR3 277 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 LOC107984156A0A0G2JMH3 177 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 TSPAN13O95857 204 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 RPS11P62280 158 aaKnown RBP eCLIP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 ARL17AQ8IVW1 177 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 C7orf69Q9H7B7 122 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 TGFAP01135 160 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 SAPCD1Q5SSQ6 148 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 BEND2Q8NDZ0 799 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 RHOVQ96L33 236 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM106BQ9NUM4 274 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 SHROOM3Q8TF72 1996 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 TPRP12270 2363 aaKnown RBP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 ATP1A1-AS1Q5TC04 95 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 Q6ZT83 130 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 PPP1R27Q86WC6 154 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 PUSL1Q8N0Z8 303 aaKnown RBP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 PGLYRP4Q96LB8 373 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 GP6Q9HCN6 339 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 FGF16O43320 207 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 BSPH1Q075Z2 132 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 RIPPLY2Q5TAB7 128 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 CDCP2Q5VXM1 449 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 ARPC1AQ92747 370 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 PTPRFP10586 1907 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 EMP1P54849 157 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 DNAJC4Q9NNZ3 241 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 PRRC2BQ5JSZ5 2229 aaKnown RBP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 LOC101059948A0A1B0GTJ6 334 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 MOSP00540 346 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF25P17030 456 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 HSPE1P61604 102 aaKnown RBP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF385CQ66K41 422 aaPredicted RBP4.74□□□□□ -1.65
PTPRD-202ENST00000356435 MEGF10Q96KG7 1140 aa4.74□□□□□ -1.65
PTPRD-202ENST00000356435 REG1AP05451 166 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 MIC13Q5XKP0 118 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 HDHD3Q9BSH5 251 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-202ENST00000356435 TDGF1P13385 188 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 EFNB2P52799 333 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ARTNQ5T4W7 220 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ZAR1Q86SH2 424 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF646O15015 1829 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-202ENST00000356435 A0A1W2PQM1 296 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 TCRBV4S1A1TA0A5B7 111 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 C9JCJ5 164 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 CD160O95971 181 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 FAM219BQ5XKK7 198 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 TMEM42Q69YG0 159 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 OR51G1Q8NGK1 321 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 SRXN1Q9BYN0 137 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 NCOR1P1Q9H4R4 102 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 FBXL7Q9UJT9 491 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 SHISA3A0PJX4 238 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 PGPA6NDG6 321 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 IGKV1D-16P01601 117 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 TIMM23BQ5SRD1 257 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 COL5A1-AS1Q5SY13 56 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 ABLIM2Q6H8Q1 611 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 SLC25A45Q8N413 288 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 SCARF2Q96GP6 870 aaPredicted RBP4.73□□□□□ -1.65
PTPRD-202ENST00000356435 PRSS22Q9GZN4 317 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 WNT5BQ9H1J7 359 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 NPIPB9F8W1W9 429 aa4.73□□□□□ -1.65
PTPRD-202ENST00000356435 TM4SF5O14894 197 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms