RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 APOA2P02652 100 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 IGSF11Q5DX21 431 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 ZFAND6Q6FIF0 208 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 SAMD12Q8N8I0 201 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.09□□□□□ -0.47
PDGFA-201ENST00000354513 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 ATG5Q9H1Y0 275 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 OR2D2Q9H210 308 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 RANGRFQ9HD47 186 aaPredicted RBP12.09□□□□□ -0.47
PDGFA-201ENST00000354513 RHBDL2Q9NX52 303 aa12.09□□□□□ -0.47
PDGFA-201ENST00000354513 FCGR3AP08637 254 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 TMEM177Q53S58 311 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 UBE2NLQ5JXB2 153 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 ZNF343Q6P1L6 599 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 OR56B1Q8NGI3 324 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 OR4A4PQ8NGN8 299 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 DDB2Q92466 427 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 SLC25A38Q96DW6 304 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 ELOVL1Q9BW60 279 aa12.08□□□□□ -0.48
PDGFA-201ENST00000354513 TINAGL1Q9GZM7 467 aaPredicted RBP12.08□□□□□ -0.48
PDGFA-201ENST00000354513 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
PDGFA-201ENST00000354513 TRBV6-7A0A0A0MS04 114 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 IZUMO1RA6ND01 250 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 MFNGO00587 321 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 FABP7O15540 132 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 HPGDSO60760 199 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 CSN3P07498 182 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 GSTT2P0CG29 244 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 ZP3P21754 424 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 SYNJ2BPP57105 145 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 BVESQ8NE79 360 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 OR9G4Q8NGQ1 327 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 MCFD2Q8NI22 146 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 MAFIPQ8WZ33 124 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 HARBI1Q96MB7 349 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 C6orf62Q9GZU0 229 aaPredicted RBP12.07□□□□□ -0.48
PDGFA-201ENST00000354513 ZNF355PQ9NSJ1 428 aa12.07□□□□□ -0.48
PDGFA-201ENST00000354513 A0A075B6Q4 140 aa12.06□□□□□ -0.48
PDGFA-201ENST00000354513 IGKV1D-8A0A087WSZ0 117 aa12.06□□□□□ -0.48
PDGFA-201ENST00000354513 BET1O15155 118 aa12.06□□□□□ -0.48
PDGFA-201ENST00000354513 APELAP0DMC3 54 aa12.06□□□□□ -0.48
PDGFA-201ENST00000354513 CD40LGP29965 261 aa12.06□□□□□ -0.48
PDGFA-201ENST00000354513 MECP2P51608 486 aaKnown RBP12.06□□□□□ -0.48
PDGFA-201ENST00000354513 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
PDGFA-201ENST00000354513 ADAD2Q8NCV1 583 aaKnown RBP12.06□□□□□ -0.48
PDGFA-201ENST00000354513 OR10R2Q8NGX6 335 aa12.06□□□□□ -0.48
PDGFA-201ENST00000354513 LINC00473A8K010 186 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 FAM25AB3EWG3 89 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 FAM25CB3EWG5 89 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 FAM25GB3EWG6 89 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 RAB27BO00194 218 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 CTDSP2O14595 271 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 RGS5O15539 181 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 SCGNO76038 276 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 CNIH1O95406 144 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 EIF4EP06730 217 aaKnown RBP12.05□□□□□ -0.48
PDGFA-201ENST00000354513 LGALS7P47929 136 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 ZNF45Q02386 682 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 HAGHQ16775 308 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 CNPY1Q3B7I2 92 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 SGPP2Q8IWX5 399 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 RAB3CQ96E17 227 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 S100A16Q96FQ6 103 aaKnown RBP12.05□□□□□ -0.48
PDGFA-201ENST00000354513 CMTM3Q96MX0 182 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 NXF2Q9GZY0 626 aaKnown RBP12.05□□□□□ -0.48
PDGFA-201ENST00000354513 DIABLOQ9NR28 239 aa12.05□□□□□ -0.48
PDGFA-201ENST00000354513 PEF1Q9UBV8 284 aaKnown RBP12.05□□□□□ -0.48
PDGFA-201ENST00000354513 ZNF230Q9UIE0 474 aaPredicted RBP12.05□□□□□ -0.48
PDGFA-201ENST00000354513 A0A0G2JLM5 398 aa12.04□□□□□ -0.48
PDGFA-201ENST00000354513 APOA1P02647 267 aa12.04□□□□□ -0.48
PDGFA-201ENST00000354513 GNB3P16520 340 aa12.04□□□□□ -0.48
PDGFA-201ENST00000354513 ELK1P19419 428 aa12.04□□□□□ -0.48
PDGFA-201ENST00000354513 PALMDQ9NP74 551 aa12.04□□□□□ -0.48
PDGFA-201ENST00000354513 SIGLEC8Q9NYZ4 499 aa12.04□□□□□ -0.48
PDGFA-201ENST00000354513 ELF5Q9UKW6 265 aaPredicted RBP12.04□□□□□ -0.48
PDGFA-201ENST00000354513 A0A0A6YYH2 397 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 A6NJ64 397 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 SHOXO15266 292 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 DIRAS3O95661 229 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 EDN2P20800 178 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 AADACP22760 399 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
PDGFA-201ENST00000354513 PRSS8Q16651 343 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 LINC00322Q6ZN03 302 aaPredicted RBP12.03□□□□□ -0.48
PDGFA-201ENST00000354513 IDO2Q6ZQW0 420 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 LAX1Q8IWV1 398 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 H1FOOQ8IZA3 346 aaPredicted RBP12.03□□□□□ -0.48
PDGFA-201ENST00000354513 TMEM68Q96MH6 324 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 SPATA25Q9BR10 227 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 MIXL1Q9H2W2 232 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 RETNQ9HD89 108 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 COA4Q9NYJ1 87 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 DMRT1Q9Y5R6 373 aa12.03□□□□□ -0.48
PDGFA-201ENST00000354513 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
PDGFA-201ENST00000354513 MSGN1A6NI15 193 aa12.02□□□□□ -0.49
PDGFA-201ENST00000354513 BMPR1BO00238 502 aa12.02□□□□□ -0.49
PDGFA-201ENST00000354513 PRH1P02810 166 aa12.02□□□□□ -0.49
PDGFA-201ENST00000354513 HIST1H1DP16402 221 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms