RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TNFRSF9Q07011 255 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 HCP5Q6MZN7 132 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 CLEC9AQ6UXN8 241 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 SLC7A5P1Q8MH63 180 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 OR2C3Q8N628 320 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 OR4A16Q8NH70 328 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 RPEQ96AT9 228 aa16.64■□□□□ 0.26
TRIM4-202ENST00000354241 A0A1W2PRD5 423 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 A0A1W2PRF3 423 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 A0A1W2PRM7 423 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 FAM90A9PA6NNJ1 464 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 SPDEFO95238 335 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 TMEM50AO95807 157 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 GAPDHP04406 335 aaKnown RBP16.64■□□□□ 0.25
TRIM4-202ENST00000354241 DVL1P1P54792 670 aaPredicted RBP16.64■□□□□ 0.25
TRIM4-202ENST00000354241 GPR157Q5UAW9 335 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 HIST2H2BCQ6DN03 193 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 OR4A47Q6IF82 309 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 PDPNQ86YL7 162 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 ZNF680Q8NEM1 530 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 RAB40CQ96S21 281 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 QTRT1Q9BXR0 403 aaKnown RBP16.64■□□□□ 0.25
TRIM4-202ENST00000354241 RBKSQ9H477 322 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 HSPB7Q9UBY9 170 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 WASHC3Q9Y3C0 194 aa16.64■□□□□ 0.25
TRIM4-202ENST00000354241 TRAV3A0A0B4J244 114 aa16.63■□□□□ 0.25
TRIM4-202ENST00000354241 TOX4O94842 621 aa16.63■□□□□ 0.25
TRIM4-202ENST00000354241 HOXB4P17483 251 aaPredicted RBP16.63■□□□□ 0.25
TRIM4-202ENST00000354241 UBE2KP61086 200 aa16.63■□□□□ 0.25
TRIM4-202ENST00000354241 ZNF767PQ75MW2 155 aa16.63■□□□□ 0.25
TRIM4-202ENST00000354241 LHX4Q969G2 390 aa16.63■□□□□ 0.25
TRIM4-202ENST00000354241 FLYWCH2Q96CP2 140 aaKnown RBP16.63■□□□□ 0.25
TRIM4-202ENST00000354241 HARBI1Q96MB7 349 aa16.63■□□□□ 0.25
TRIM4-202ENST00000354241 LYRM2Q9NU23 88 aaPredicted RBP16.63■□□□□ 0.25
TRIM4-202ENST00000354241 INSIG2Q9Y5U4 225 aa16.63■□□□□ 0.25
TRIM4-202ENST00000354241 IGHV3-72A0A0B4J1Y9 119 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 HTR1DP28221 377 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 ARHGDIBP52566 201 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 PAX9P55771 341 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 RPL23AP62750 156 aaKnown RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 EXOSC2Q13868 293 aaKnown RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 MOB3BQ86TA1 216 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 OSR1Q8TAX0 266 aaPredicted RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 SMIM3Q9BZL3 60 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 UNKLQ9H9P5 680 aaKnown RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 MED13LQ71F56 2210 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 WNK2Q9Y3S1 2297 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 IGHV1-3A0A0C4DH29 117 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 IGSF23A1L1A6 192 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 SRRM4A7MD48 611 aaKnown RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 ODF3BA8MYP8 253 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 RNASEK-C17orf49H0YIS7 233 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 H3BP45 60 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 LY6LH3BQJ8 138 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 MED6O75586 246 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 MC5RP33032 325 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 RAB13P51153 203 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 UBA52P62987 128 aaKnown RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 RELBQ01201 579 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 POU2AF1Q16633 256 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 TMEM177Q53S58 311 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 BSCL2Q96G97 398 aaPredicted RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 FBXL17Q9UF56 701 aa16.62■□□□□ 0.25
TRIM4-202ENST00000354241 POLR3KQ9Y2Y1 108 aaPredicted RBP16.62■□□□□ 0.25
TRIM4-202ENST00000354241 LEUTXA8MZ59 168 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 TXNL1O43396 289 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 IFNA7P01567 189 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 RPS16P62249 146 aaKnown RBP16.61■□□□□ 0.25
TRIM4-202ENST00000354241 EWSR1Q01844 656 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRIM4-202ENST00000354241 NHLH2Q02577 135 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 SPINK9Q5DT21 86 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 TPTE2P1Q5T6R2 138 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 OR4C13Q8NGP0 309 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 ST8SIA2Q92186 375 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 AIFM2Q9BRQ8 373 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 SLC25A31Q9H0C2 315 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 BEX4Q9NWD9 120 aaPredicted RBP16.61■□□□□ 0.25
TRIM4-202ENST00000354241 PSENENQ9NZ42 101 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 DPM3Q9P2X0 92 aa16.61■□□□□ 0.25
TRIM4-202ENST00000354241 IFNA17P01571 189 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 SLC25A16P16260 332 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 DEFB113Q30KQ7 82 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 LDLRAD2Q5SZI1 272 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 TMEM252Q8N6L7 170 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 TBX15Q96SF7 602 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 CYTL1Q9NRR1 136 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 TENM4Q6N022 2769 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 TET2Q6N021 2002 aaPredicted RBP16.6■□□□□ 0.25
TRIM4-202ENST00000354241 FBN2P35556 2912 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 CEBPZOSA8MTT3 80 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 SAA1P0DJI8 122 aaPredicted RBP16.6■□□□□ 0.25
TRIM4-202ENST00000354241 CEACAM3P40198 252 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 LHFPL4Q7Z7J7 247 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 ZDHHC16Q969W1 377 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 UBQLN2Q9UHD9 624 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 WSB1Q9Y6I7 421 aa16.6■□□□□ 0.25
TRIM4-202ENST00000354241 ABCA2Q9BZC7 2435 aa16.59■□□□□ 0.25
TRIM4-202ENST00000354241 TAAR5O14804 337 aa16.59■□□□□ 0.25
TRIM4-202ENST00000354241 USF1P22415 310 aaPredicted RBP16.59■□□□□ 0.25
TRIM4-202ENST00000354241 SMIM8Q96KF7 97 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms