RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 VBP1P61758 197 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 DEFA5Q01523 94 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 PRSS8Q16651 343 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 VMA21Q3ZAQ7 101 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 TEX45Q8NA69 505 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 POC5Q8NA72 575 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 OR13F1Q8NGS4 319 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
HMGN3-202ENST00000344726 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
HMGN3-202ENST00000344726 RHOVQ96L33 236 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 PRR25Q96S07 402 aa11.13□□□□□ -0.63
HMGN3-202ENST00000344726 RYR3Q15413 4870 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 LINC01619G3V211 115 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 PPYP01298 95 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 TRGV3P03979 118 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 TAS2R20P59543 309 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 VKORC1L1Q8N0U8 176 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 MFSD4AQ8N468 514 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 SECTM1Q8WVN6 248 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 S100A16Q96FQ6 103 aaKnown RBP11.12□□□□□ -0.63
HMGN3-202ENST00000344726 HSD17B10Q99714 261 aaKnown RBP11.12□□□□□ -0.63
HMGN3-202ENST00000344726 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 NAA50Q9GZZ1 169 aaKnown RBP11.12□□□□□ -0.63
HMGN3-202ENST00000344726 SLA2Q9H6Q3 261 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 ZNF430Q9H8G1 570 aaPredicted RBP11.12□□□□□ -0.63
HMGN3-202ENST00000344726 CCL28Q9NRJ3 127 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 TAS2R8Q9NYW2 309 aa11.12□□□□□ -0.63
HMGN3-202ENST00000344726 LSM4Q9Y4Z0 139 aaKnown RBP11.12□□□□□ -0.63
HMGN3-202ENST00000344726 MSGN1A6NI15 193 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 OVOL1O14753 267 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 TNFSF12O43508 249 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 RBMXL2O75526 392 aaKnown RBP11.11□□□□□ -0.63
HMGN3-202ENST00000344726 EIF4EP06730 217 aaKnown RBP11.11□□□□□ -0.63
HMGN3-202ENST00000344726 CDK10Q15131 360 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 TNXAQ16473 311 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 TMEM69Q5SWH9 247 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 C10orf55Q5SWW7 151 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 OR5AP2Q8NGF4 316 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 TCTEX1D2Q8WW35 142 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 SRSF12Q8WXF0 261 aaKnown RBP11.11□□□□□ -0.63
HMGN3-202ENST00000344726 DCUN1D5Q9BTE7 237 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 ZNF355PQ9NSJ1 428 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 ANAPC10Q9UM13 185 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 PRELID3BQ9Y3B1 194 aa11.11□□□□□ -0.63
HMGN3-202ENST00000344726 H3BUA1 57 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 CD40LGP29965 261 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 ECI1P42126 302 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 CBX5P45973 191 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 VAX1Q5SQQ9 334 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 ZNF66Q6ZN08 573 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 ACOT12Q8WYK0 555 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 TMEM68Q96MH6 324 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 TINAGL1Q9GZM7 467 aaPredicted RBP11.1□□□□□ -0.63
HMGN3-202ENST00000344726 PGPEP1Q9NXJ5 209 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 COMMD3Q9UBI1 195 aa11.1□□□□□ -0.63
HMGN3-202ENST00000344726 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
HMGN3-202ENST00000344726 RAMP3O60896 148 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 BRI3O95415 125 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 HSPB1P04792 205 aaKnown RBP11.09□□□□□ -0.63
HMGN3-202ENST00000344726 RFX2P48378 723 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 FXYD4P59646 89 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 CD69Q07108 199 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 MSMO1Q15800 293 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 CTF1Q16619 201 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 ZNF818PQ6ZRF7 136 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 PUSL1Q8N0Z8 303 aaKnown RBP11.09□□□□□ -0.63
HMGN3-202ENST00000344726 ADAD2Q8NCV1 583 aaKnown RBP11.09□□□□□ -0.63
HMGN3-202ENST00000344726 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 GIMAP1Q8WWP7 306 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 PHB2Q99623 299 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 SLC5A7Q9GZV3 580 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 IFT46Q9NQC8 304 aa11.09□□□□□ -0.63
HMGN3-202ENST00000344726 A0A1B0GW64 132 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 E7EUB6 86 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 NAT1P18440 290 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 DYRK1AQ13627 763 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 ANKRD13BQ86YJ7 626 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 MMD2Q8IY49 270 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 COA4Q9NYJ1 87 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 EHFQ9NZC4 300 aa11.08□□□□□ -0.64
HMGN3-202ENST00000344726 C13orf42A0A1B0GVH6 325 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 ANKRD34BA5PLL1 514 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 TEX22C9J3V5 150 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 SULT1C2O00338 296 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 SAP30O75446 220 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 KBTBD11O94819 623 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 OR2A4O95047 310 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 GABARAPO95166 117 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 APOA1P02647 267 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 PMP2P02689 132 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 PRH1P02810 166 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 OR9G9P0C7N8 305 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 ELK1P19419 428 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 PRSS3P35030 304 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 INSL3P51460 131 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 ZNF45Q02386 682 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 ACSM6Q6P461 480 aa11.07□□□□□ -0.64
HMGN3-202ENST00000344726 DHRS11Q6UWP2 260 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms