RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 NPFFO15130 113 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 HRASP01112 189 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 NKX2-5P52952 324 aaPredicted RBP13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 H2BFWTQ7Z2G1 175 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 VKORC1L1Q8N0U8 176 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 DYNAPQ8N1N2 210 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 OR4C13Q8NGP0 309 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 C17orf50Q8WW18 174 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 FLYWCH2Q96CP2 140 aaKnown RBP13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 MALSU1Q96EH3 234 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 RHOVQ96L33 236 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 COA4Q9NYJ1 87 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 SRRM4A7MD48 611 aaKnown RBP13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 AVPP01185 164 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 MBPP02686 304 aaPredicted RBP13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 SAA4P35542 130 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 ERVK-16P61578 105 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 HABP2Q14520 560 aaPredicted RBP13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 SSX2Q16385 188 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 CCDC144NLQ6NUI1 221 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 SSX9Q7RTT3 188 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 CFHR4Q92496 578 aa13.17□□□□□ -0.3
CEACAM1-202ENST00000344391 NOTCH2Q04721 2471 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 CELSR1Q9NYQ6 3014 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 TRAV40A0A0B4J280 105 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 H0YIZ8 118 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 TIMM23O14925 209 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 SHOXO15266 292 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 SCGB1D2O95969 90 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 SLC25A4P12235 298 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 ARHGDIBP52566 201 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 CXorf66Q5JRM2 361 aaPredicted RBP13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 CYB5R2Q6BCY4 276 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 C11orf87Q6NUJ2 197 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 CIARTQ8N365 385 aaPredicted RBP13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 OR1S1Q8NH92 325 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 AIFM2Q9BRQ8 373 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 RNF126Q9BV68 326 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 TMEM140Q9NV12 185 aa13.16□□□□□ -0.3
CEACAM1-202ENST00000344391 MYO9AB2RTY4 2548 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 OR9G9P0C7N8 305 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 IGHV4-38-2P0DP08 117 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 PAX6P26367 422 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 CD1BP29016 333 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 S100A10P60903 97 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 RPS16P62249 146 aaKnown RBP13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 ID3Q02535 119 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 GPR157Q5UAW9 335 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 OR4A47Q6IF82 309 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 HARBI1Q96MB7 349 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 MS4A7Q9GZW8 240 aaPredicted RBP13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 ZFP57Q9NU63 452 aa13.15□□□□□ -0.3
CEACAM1-202ENST00000344391 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 IGHV3OR16-10A0A075B7F0 116 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 K7EPK0 472 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 ST8SIA3O43173 380 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 LYL1P12980 280 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 KLF17Q5JT82 389 aaPredicted RBP13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 PRSS54Q6PEW0 395 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 FOXRED2Q8IWF2 684 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 FAM71E2Q8N5Q1 922 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 RITA1Q96K30 269 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 LSM5Q9Y4Y9 91 aaKnown RBP13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 POMT1Q9Y6A1 747 aa13.14□□□□□ -0.31
CEACAM1-202ENST00000344391 FXYD6-FXYD2A0A087WZ82 144 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 TRAV3A0A0B4J244 114 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 HMSDA8MTL9 139 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 VENTXO95231 258 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 IGLV2-23P01705 113 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 PET100P0DJ07 73 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 LGALS7P47929 136 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 RELBQ01201 579 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 TMEM65Q6PI78 240 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 PUSL1Q8N0Z8 303 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 GRPEL2Q8TAA5 225 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 TNCP24821 2201 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 FAM90A26D6RGX4 464 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 DEDDO75618 318 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 RLN2P04090 185 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 SAA1P0DJI8 122 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 AARDQ4LEZ3 155 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 RNF5Q99942 180 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 BET1LQ9NYM9 111 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 NSG2Q9Y328 171 aa13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 TET2Q6N021 2002 aaPredicted RBP13.13□□□□□ -0.31
CEACAM1-202ENST00000344391 SMAD7O15105 426 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms