RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SRIP30626 198 aa12.46□□□□□ -0.42
CLCN1-201ENST00000343257 GFRA1P56159 465 aa12.46□□□□□ -0.42
CLCN1-201ENST00000343257 VAMP3Q15836 100 aa12.46□□□□□ -0.42
CLCN1-201ENST00000343257 RNASE7Q9H1E1 156 aaKnown RBP12.46□□□□□ -0.42
CLCN1-201ENST00000343257 RARRES3Q9UL19 164 aa12.46□□□□□ -0.42
CLCN1-201ENST00000343257 SELENOKQ9Y6D0 94 aa12.46□□□□□ -0.42
CLCN1-201ENST00000343257 FOXH1O75593 365 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 ZNF83P51522 516 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 RAC3P60763 192 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 RELBQ01201 579 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 PDLIM3Q53GG5 364 aaPredicted RBP12.45□□□□□ -0.42
CLCN1-201ENST00000343257 H2BFWTQ7Z2G1 175 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 RABEPKQ7Z6M1 372 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 SERTAD4Q9NUC0 356 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 ZNF391Q9UJN7 358 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 MED12LQ86YW9 2145 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 IGLV3-12A0A075B6K2 115 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 A0A1W2PS18 150 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 ZNF716A6NP11 495 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 DKK1O94907 266 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 IGHV3-13P01766 116 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 IGHV3-7P01780 117 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 GLB1P16278 677 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 CTRLP40313 264 aa12.45□□□□□ -0.42
CLCN1-201ENST00000343257 MRPL52Q86TS9 123 aaKnown RBP12.45□□□□□ -0.42
CLCN1-201ENST00000343257 PARD6GQ9BYG4 376 aaPredicted RBP12.45□□□□□ -0.42
CLCN1-201ENST00000343257 LOC105371242A0A075B767 164 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 DPRXA6NFQ7 191 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 ACTL6BO94805 426 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 CD1BP29016 333 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 TPRX1Q8N7U7 411 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 RFESDQ8TAC1 157 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 C5orf30Q96GV9 206 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 VPS25Q9BRG1 176 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 FKBP2P26885 142 aaKnown RBP12.44□□□□□ -0.42
CLCN1-201ENST00000343257 KLF3P57682 345 aaPredicted RBP12.44□□□□□ -0.42
CLCN1-201ENST00000343257 UBE2V1Q13404 147 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 RPEL1Q2QD12 228 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 Q8NFD4 153 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 PRDM6Q9NQX0 595 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 OR2H2O95918 312 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
CLCN1-201ENST00000343257 LGALS4P56470 323 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 SRSF7Q16629 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLCN1-201ENST00000343257 Q56UQ5 140 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
CLCN1-201ENST00000343257 LRP5LA4QPB2 252 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 VKORC1L1Q8N0U8 176 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 ZNF738Q8NE65 137 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 SPSB4Q96A44 273 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 KRTAP27-1Q3LI81 207 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 VHLLQ6RSH7 139 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 LOXL4Q96JB6 756 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 GAL3ST2Q9H3Q3 398 aa12.43□□□□□ -0.42
CLCN1-201ENST00000343257 A8MXE2 369 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.42□□□□□ -0.42
CLCN1-201ENST00000343257 TSPOP30536 169 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 SSR4P51571 173 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 NXPH1P58417 271 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
CLCN1-201ENST00000343257 NHLRC2Q8NBF2 726 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 AGBL5Q8NDL9 886 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 BORCS7Q96B45 105 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 OCIAD1Q9NX40 245 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 PRRC2CQ9Y520 2896 aaKnown RBP12.42□□□□□ -0.42
CLCN1-201ENST00000343257 ANKRD30BLA7E2S9 258 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 PCOLCEQ15113 449 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 FBLN7Q53RD9 439 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 GUSBP11Q6P575 273 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 ORAOV1Q8WV07 137 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 PRDM14Q9GZV8 571 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 BET1LQ9NYM9 111 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 COX11Q9Y6N1 276 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 C15orf62A8K5M9 175 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 C10orf142B7Z368 130 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 MRPL33O75394 65 aaKnown RBP12.42□□□□□ -0.42
CLCN1-201ENST00000343257 MGST1P10620 155 aaKnown RBP12.42□□□□□ -0.42
CLCN1-201ENST00000343257 RAC2P15153 192 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 SYT13Q7L8C5 426 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 Q8N7P7 452 aa12.42□□□□□ -0.42
CLCN1-201ENST00000343257 SEPSECSQ9HD40 501 aaKnown RBP12.42□□□□□ -0.42
CLCN1-201ENST00000343257 BRWD1-AS2P59051 145 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 PQLC2Q6ZP29 291 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 ABHD12Q8N2K0 398 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 GMPPAQ96IJ6 420 aaPredicted RBP12.41□□□□□ -0.42
CLCN1-201ENST00000343257 GCM1Q9NP62 436 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 FAM90A26D6RGX4 464 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 NEURL1O76050 574 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 GGNQ86UU5 652 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 KCNS1Q96KK3 526 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 SF3B5Q9BWJ5 86 aaKnown RBP12.41□□□□□ -0.42
CLCN1-201ENST00000343257 CLEC7AQ9BXN2 247 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 MS4A5Q9H3V2 200 aa12.41□□□□□ -0.42
CLCN1-201ENST00000343257 CDIPTO14735 213 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 CA2P00918 260 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 CGAP01215 116 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 GRPP07492 148 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 ESDP10768 282 aa12.4□□□□□ -0.42
CLCN1-201ENST00000343257 EN2P19622 333 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms