RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ZNF256Q9Y2P7 627 aaPredicted RBP15.56■□□□□ 0.08
SYNE2-201ENST00000341472 RBMX2Q9Y388 322 aaKnown RBP15.56■□□□□ 0.08
SYNE2-201ENST00000341472 PRELID3BQ9Y3B1 194 aa15.56■□□□□ 0.08
SYNE2-201ENST00000341472 LSM4Q9Y4Z0 139 aaKnown RBP15.56■□□□□ 0.08
SYNE2-201ENST00000341472 A0A0A6YYH2 397 aa15.55■□□□□ 0.08
SYNE2-201ENST00000341472 A0A0G2JLM5 398 aa15.55■□□□□ 0.08
SYNE2-201ENST00000341472 C13orf42A0A1B0GVH6 325 aa15.55■□□□□ 0.08
SYNE2-201ENST00000341472 MSGN1A6NI15 193 aa15.55■□□□□ 0.08
SYNE2-201ENST00000341472 A6NJ64 397 aa15.55■□□□□ 0.08
SYNE2-201ENST00000341472 PRSS8Q16651 343 aa15.55■□□□□ 0.08
SYNE2-201ENST00000341472 FCGR3BO75015 233 aa15.54■□□□□ 0.08
SYNE2-201ENST00000341472 SAP30O75446 220 aa15.54■□□□□ 0.08
SYNE2-201ENST00000341472 LY86O95711 162 aa15.54■□□□□ 0.08
SYNE2-201ENST00000341472 MRGPRG-AS1Q2M3A8 158 aa15.54■□□□□ 0.08
SYNE2-201ENST00000341472 C11orf87Q6NUJ2 197 aa15.54■□□□□ 0.08
SYNE2-201ENST00000341472 DYNC2LI1Q8TCX1 351 aa15.54■□□□□ 0.08
SYNE2-201ENST00000341472 SLC25A38Q96DW6 304 aa15.54■□□□□ 0.08
SYNE2-201ENST00000341472 RANGRFQ9HD47 186 aaPredicted RBP15.54■□□□□ 0.08
SYNE2-201ENST00000341472 IGKV1D-13A0A0B4J2D9 117 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 BRI3O95415 125 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 IGKV1-13P0DP09 117 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 ZNF182P17025 639 aaPredicted RBP15.53■□□□□ 0.08
SYNE2-201ENST00000341472 BEST4Q8NFU0 473 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 AP3S1Q92572 193 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 KCTD12Q96CX2 325 aaKnown RBP15.53■□□□□ 0.08
SYNE2-201ENST00000341472 PHB2Q99623 299 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 AUNIPQ9H7T9 357 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 CCDC59Q9P031 241 aaKnown RBP15.53■□□□□ 0.08
SYNE2-201ENST00000341472 SPATA2Q9UM82 520 aa15.53■□□□□ 0.08
SYNE2-201ENST00000341472 MRPS7Q9Y2R9 242 aaKnown RBP15.53■□□□□ 0.08
SYNE2-201ENST00000341472 ACTL6BO94805 426 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 IGLV2-14P01704 120 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 NHLRC4P0CG21 123 aaPredicted RBP15.52■□□□□ 0.08
SYNE2-201ENST00000341472 AADACP22760 399 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 ARPC4P59998 168 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 RPL30P62888 115 aaKnown RBP15.52■□□□□ 0.08
SYNE2-201ENST00000341472 TNXAQ16473 311 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 ACSM6Q6P461 480 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 IDO2Q6ZQW0 420 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 KCTD9Q7L273 389 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 HOGA1Q86XE5 327 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 ACOT12Q8WYK0 555 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 OR4C12Q96R67 309 aa15.52■□□□□ 0.08
SYNE2-201ENST00000341472 HSD17B10Q99714 261 aaKnown RBP15.52■□□□□ 0.08
SYNE2-201ENST00000341472 TINAGL1Q9GZM7 467 aaPredicted RBP15.52■□□□□ 0.08
SYNE2-201ENST00000341472 CREBL2O60519 120 aaPredicted RBP15.51■□□□□ 0.07
SYNE2-201ENST00000341472 APELAP0DMC3 54 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 ZP3P21754 424 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 FCGR2CP31995 323 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 OR2B11Q5JQS5 317 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 GVQW1Q8N7I0 195 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 USMG5Q96IX5 58 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 ELOVL1Q9BW60 279 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 COA4Q9NYJ1 87 aa15.51■□□□□ 0.07
SYNE2-201ENST00000341472 ANKRD34BA5PLL1 514 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 MPPED1O15442 326 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 SAA1P0DJI8 122 aaPredicted RBP15.5■□□□□ 0.07
SYNE2-201ENST00000341472 CDK10Q15131 360 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 MZT2AQ6P582 158 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 MMD2Q8IY49 270 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 MFSD4AQ8N468 514 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 OR6Q1Q8NGQ2 317 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 TCTEX1D2Q8WW35 142 aa15.5■□□□□ 0.07
SYNE2-201ENST00000341472 SRSF12Q8WXF0 261 aaKnown RBP15.5■□□□□ 0.07
SYNE2-201ENST00000341472 S100A16Q96FQ6 103 aaKnown RBP15.5■□□□□ 0.07
SYNE2-201ENST00000341472 ZNF430Q9H8G1 570 aaPredicted RBP15.5■□□□□ 0.07
SYNE2-201ENST00000341472 OR9G9P0C7N8 305 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 PTHLHP12272 177 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 CBX5P45973 191 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 ZNF66Q6ZN08 573 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 OVCH2Q7RTZ1 564 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 ADAD2Q8NCV1 583 aaKnown RBP15.49■□□□□ 0.07
SYNE2-201ENST00000341472 OR4S2Q8NH73 311 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 SPIN2AQ99865 258 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 SPIN2BQ9BPZ2 258 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 TAS2R8Q9NYW2 309 aa15.49■□□□□ 0.07
SYNE2-201ENST00000341472 XRCC3O43542 346 aa15.48■□□□□ 0.07
SYNE2-201ENST00000341472 FCER2P06734 321 aa15.48■□□□□ 0.07
SYNE2-201ENST00000341472 SPNP16150 400 aa15.48■□□□□ 0.07
SYNE2-201ENST00000341472 EIF4EBP1Q13541 118 aaPredicted RBP15.48■□□□□ 0.07
SYNE2-201ENST00000341472 CNPY1Q3B7I2 92 aa15.48■□□□□ 0.07
SYNE2-201ENST00000341472 SECTM1Q8WVN6 248 aa15.48■□□□□ 0.07
SYNE2-201ENST00000341472 CCL28Q9NRJ3 127 aa15.48■□□□□ 0.07
SYNE2-201ENST00000341472 PEF1Q9UBV8 284 aaKnown RBP15.48■□□□□ 0.07
SYNE2-201ENST00000341472 SMAD5-AS1Q9Y6J3 95 aa15.48■□□□□ 0.07
SYNE2-201ENST00000341472 OR2A4O95047 310 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 KLF5Q13887 457 aaPredicted RBP15.47■□□□□ 0.07
SYNE2-201ENST00000341472 MSMO1Q15800 293 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 ZNF343Q6P1L6 599 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 VKORC1L1Q8N0U8 176 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 ZBTB34Q8NCN2 500 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 VSTM2AQ8TAG5 236 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 OR2A7Q96R45 310 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 ASCL2Q99929 193 aa15.47■□□□□ 0.07
SYNE2-201ENST00000341472 SLIRPQ9GZT3 109 aaKnown RBP15.47■□□□□ 0.07
SYNE2-201ENST00000341472 HRASP01112 189 aa15.46■□□□□ 0.07
SYNE2-201ENST00000341472 KIR2DS2P43631 304 aa15.46■□□□□ 0.07
SYNE2-201ENST00000341472 BRWD1-AS2P59051 145 aa15.46■□□□□ 0.07
SYNE2-201ENST00000341472 DYRK1AQ13627 763 aa15.46■□□□□ 0.07
SYNE2-201ENST00000341472 TATDN3Q17R31 274 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms