RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 STX12Q86Y82 276 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 FAM213BQ8TBF2 198 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 MARVELD3Q96A59 401 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 RHOVQ96L33 236 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 NCOR1P1Q9H4R4 102 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 FAM212BQ9NTI7 297 aaPredicted RBP6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 NAV3Q8IVL0 2385 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 HPRT1P00492 218 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 IFNA17P01571 189 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 CDKN1AP38936 164 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 EIF5AP63241 154 aaKnown RBP6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 DEFA5Q01523 94 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 PJVKQ0ZLH3 352 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 BTN1A1Q13410 526 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 EIF5AL1Q6IS14 154 aaKnown RBP6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 HEPN1Q6WQI6 88 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 ABHD12Q8N2K0 398 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 PIP4P2Q8N4L2 257 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF525Q8N782 197 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 DTD1Q8TEA8 209 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 RITA1Q96K30 269 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 ATP5SQ99766 215 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 TREM1Q9NP99 234 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 MMP26Q9NRE1 261 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 TMEM140Q9NV12 185 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 COA4Q9NYJ1 87 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 NBPF19A0A087WUL8 3843 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 TMEM218A2RU14 115 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 PMS2P5A8MQ11 134 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 CEBPZOSA8MTT3 80 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 RNF224P0DH78 156 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 MMP9P14780 707 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 CAMLGP49069 296 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 DLX6P56179 175 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 RELBQ01201 579 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF266Q14584 549 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 SAT2Q96F10 170 aaPredicted RBP6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 RARRES2Q99969 163 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 SCRT1Q9BWW7 348 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 MRPL20Q9BYC9 149 aaKnown RBP6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 SESN1Q9Y6P5 492 aa6.04□□□□□ -1.44
SRFBP1-201ENST00000339397 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 IGHV3-72A0A0B4J1Y9 119 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 KRBOX1C9JBD0 128 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 RRHO14718 337 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 M6PRP20645 277 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 RAB7AP51149 207 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 BAXQ07812 192 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 MSMO1Q15800 293 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 OR4A47Q6IF82 309 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 TMEM14EPQ6UXP3 125 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 SSX7Q7RTT5 188 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 LYPD6BQ8NI32 183 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 TMEM170AQ8WVE7 144 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 PARP11Q9NR21 331 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 PRELID3BQ9Y3B1 194 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 UBE2L5PA0A1B0GUS4 154 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 RAB19A4D1S5 217 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 E7EUB6 86 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 NQO2P16083 231 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 SLC25A24Q6NUK1 477 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 CD300LFQ8TDQ1 290 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 LRRC46Q96FV0 321 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 UQCC1Q9NVA1 299 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 KAAG1Q9UBP8 84 aa6.03□□□□□ -1.44
SRFBP1-201ENST00000339397 C15orf62A8K5M9 175 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 RNASEK-C17orf49H0YIS7 233 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 HMGB3O15347 200 aaKnown RBP6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 PPIHO43447 177 aaKnown RBP6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 TSPAN15O95858 294 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 IGHV2-70P01814 119 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 SNCAP37840 140 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 F2RL1P55085 397 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 MEF2CQ06413 473 aaPredicted RBP6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 SLC38A11Q08AI6 406 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 TMEM95Q3KNT9 176 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 TMEM155Q4W5P6 130 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 C11orf71Q6IPW1 123 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 OR4A16Q8NH70 328 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 HINT2Q9BX68 163 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 GAL3ST2Q9H3Q3 398 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 RPRMQ9NS64 109 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 USP9YO00507 2555 aaPredicted RBP6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 FAM90A26D6RGX4 464 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 H7C2Y5 167 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 J3QR06 171 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 ITGB1BP1O14713 200 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 FBP1P09467 338 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 IGHV1-8P0DP01 117 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 SFTPCP11686 197 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 TAS2R30P59541 319 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 BLOC1S1P78537 153 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 SMUG1Q53HV7 270 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 LDLRAD2Q5SZI1 272 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 SPSB3Q6PJ21 355 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 ETV3LQ6ZN32 361 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 TCTEX1D1Q8N7M0 179 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 OR13D1Q8NGV5 346 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 OR10X1Q8NGY0 326 aa6.02□□□□□ -1.45
SRFBP1-201ENST00000339397 OR4S2Q8NH73 311 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms