RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RPS10P46783 165 aaKnown RBP7.3□□□□□ -1.24
SNCA-201ENST00000336904 MSMO1Q15800 293 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 C4orf17Q53FE4 359 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 LYPD2Q6UXB3 125 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 SLC39A9Q9NUM3 307 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 WNK2Q9Y3S1 2297 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 ITPR1Q14643 2758 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 CRYABP02511 175 aaKnown RBP7.3□□□□□ -1.24
SNCA-201ENST00000336904 CD200P41217 278 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 FLI1Q01543 452 aaPredicted RBP7.3□□□□□ -1.24
SNCA-201ENST00000336904 NCMAPQ5T1S8 102 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 TMEM14EPQ6UXP3 125 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 OR10P1Q8NGE3 313 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 OR4A16Q8NH70 328 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 PRR7Q8TB68 274 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 SNX22Q96L94 193 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 LURAP1Q96LR2 239 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 TMEM140Q9NV12 185 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 RNF7Q9UBF6 113 aa7.3□□□□□ -1.24
SNCA-201ENST00000336904 CACNA1BQ00975 2339 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 MALRD1Q5VYJ5 2156 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 FAM90A27PA6NNH2 459 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 IFNL4K9M1U5 179 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 P0C879 139 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 ADIPOQQ15848 244 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 MLANAQ16655 118 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 WDR25Q64LD2 544 aaPredicted RBP7.29□□□□□ -1.24
SNCA-201ENST00000336904 SLC16A13Q7RTY0 426 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 OR51G1Q8NGK1 321 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 LINC01560Q8TB33 94 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 GAFA1Q96PS6 74 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 IGHV3-72A0A0B4J1Y9 119 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 TRGV8A0A0C4DH27 118 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 LOC102723971A0A1B0GUV8 181 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 PGPEP1LA6NFU8 196 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 C16orf97H3BN30 126 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 IFNA4P05014 189 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 HOXA1P49639 335 aaPredicted RBP7.29□□□□□ -1.24
SNCA-201ENST00000336904 OR10G4Q8NGN3 311 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 OR10G9Q8NGN4 311 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 OR10G7Q8NGN6 311 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 WFIKKN1Q96NZ8 548 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 S1PR3Q99500 378 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 OR6C3Q9NZP0 311 aa7.29□□□□□ -1.24
SNCA-201ENST00000336904 PMS2P5A8MQ11 134 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 BCL2P10415 239 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 RAB5AP20339 215 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 TUBG1P23258 451 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 GATA2P23769 480 aaPredicted RBP7.28□□□□□ -1.24
SNCA-201ENST00000336904 CEACAM8P31997 349 aaPredicted RBP7.28□□□□□ -1.24
SNCA-201ENST00000336904 TIMP3P35625 211 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 SELENOVP59797 346 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 ADIRFQ15847 76 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 LHFPL4Q7Z7J7 247 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 ZNF383Q8NA42 475 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 LFNGQ8NES3 379 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 Q8WTZ3 238 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 RHOVQ96L33 236 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 NIPSNAP3BQ9BS92 247 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 SFXN3Q9BWM7 321 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 NPCDR1Q9BY65 106 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 C1orf196B1AJZ1 125 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 LHBP01229 141 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 S100A6P06703 90 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 PRB4P10163 310 aaPredicted RBP7.28□□□□□ -1.24
SNCA-201ENST00000336904 SLC25A6P12236 298 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 GZMHP20718 246 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 TDGF1P3P51864 188 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 CDSNQ15517 529 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 TMEM41BQ5BJD5 291 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 MIC13Q5XKP0 118 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 FAM90A2PQ658T7 463 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 TMEM170AQ8WVE7 144 aa7.28□□□□□ -1.24
SNCA-201ENST00000336904 HSD17B10Q99714 261 aaKnown RBP7.28□□□□□ -1.24
SNCA-201ENST00000336904 IGLV3-9A0A075B6K5 115 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 TRGV10A0A0A0MS01 117 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 PAGE4O60829 102 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 ADH4P08319 380 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 LGALS4P56470 323 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 MRPS11P82912 194 aaKnown RBP7.27□□□□□ -1.24
SNCA-201ENST00000336904 TBR1Q16650 682 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 ZNF506Q5JVG8 444 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 ASPHD1Q5U4P2 390 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 TMEM108Q6UXF1 575 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 COMMD1Q8N668 190 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 OR10W1Q8NGF6 305 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 OR4F5Q8NH21 305 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 EDARADDQ8WWZ3 215 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 RAB24Q969Q5 203 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 OR4F4Q96R69 305 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 C12orf57Q99622 126 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 DERL1Q9BUN8 251 aa7.27□□□□□ -1.24
SNCA-201ENST00000336904 SRRM4A7MD48 611 aaKnown RBP7.27□□□□□ -1.25
SNCA-201ENST00000336904 RAB29O14966 203 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 CYB5BO43169 146 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 ACTL6BO94805 426 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 YIF1AO95070 293 aa7.27□□□□□ -1.25
SNCA-201ENST00000336904 HSPB1P04792 205 aaKnown RBP7.27□□□□□ -1.25
SNCA-201ENST00000336904 RD3LP0DJH9 198 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms