RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SCTP09683 121 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 OR2K2Q8NGT1 345 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 TRAV8-6A0A0B4J262 113 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 TMEM250H0YL14 139 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 NPFFO15130 113 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 UNQ9370/PRO34162Q6UXP9 181 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 EEF1AKMT3Q96AZ1 226 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 TBL2Q9Y4P3 447 aaKnown RBP11.23□□□□□ -0.61
HLCS-201ENST00000336648 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 IGKV3D-15A0A087WSY6 115 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 IGHV3-21A0A0B4J1V1 117 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 A0A1W2PQF6 199 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 NTN1O95631 604 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 IGKV3-15P01624 115 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 MIC13Q5XKP0 118 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 GP6Q9HCN6 339 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 H7C1H1 209 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 GDF9O60383 454 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 C5orf30Q96GV9 206 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 PLSCR2Q9NRY7 297 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 RRHO14718 337 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 LDLRAD4O15165 306 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 FTH1P19P0C7X4 201 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 CACNA1CQ13936 2221 aa11.23□□□□□ -0.61
HLCS-201ENST00000336648 DANCRP0C864 163 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 HIST1H2BAQ96A08 127 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 APELAP0DMC3 54 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 MPTX1A8MV57 137 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 UNC119Q13432 240 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 C10orf111Q8N326 155 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 Q96M66 194 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 FOXD3Q9UJU5 478 aaPredicted RBP11.22□□□□□ -0.61
HLCS-201ENST00000336648 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 ITGB4P16144 1822 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 NPIPB11E5RHQ5 1161 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 TMEM50AO95807 157 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 MARCH11A6NNE9 402 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 GLIPR1P48060 266 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 TMPRSS3P57727 454 aa11.22□□□□□ -0.61
HLCS-201ENST00000336648 SNRPD3P62318 126 aaKnown RBP11.22□□□□□ -0.61
HLCS-201ENST00000336648 IGKV3D-11A0A0A0MRZ8 115 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 TRBV7-9A0A0J9YWB2 115 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 A0A1B0GW15 77 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 IGKV3-11P04433 115 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 FXYD3Q14802 87 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.61
HLCS-201ENST00000336648 MEGF9Q9H1U4 602 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 NPPCP23582 126 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 SSTR5P35346 364 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 TCF19Q9Y242 345 aa11.21□□□□□ -0.61
HLCS-201ENST00000336648 H3BRM9 83 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 HOXA5P20719 270 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 ZNF56Q15929 161 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 CXorf66Q5JRM2 361 aaPredicted RBP11.21□□□□□ -0.62
HLCS-201ENST00000336648 HCP5Q6MZN7 132 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 ELOVL5Q9NYP7 299 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 GPX1P07203 203 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 C2orf88Q9BSF0 95 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 RNF115Q9Y4L5 304 aa11.21□□□□□ -0.62
HLCS-201ENST00000336648 KIAA1551Q9HCM1 1747 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 PPIAL4CA0A0B4J2A2 164 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 GRIFINA4D1Z8 144 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 PPIAL4GP0DN37 164 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 SPAARA0A1B0GVQ0 90 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 ARL14EPLP0DKL9 152 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 RND3P61587 244 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 LCN2P80188 198 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 MBNL2Q5VZF2 373 aaKnown RBP11.2□□□□□ -0.62
HLCS-201ENST00000336648 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.2□□□□□ -0.62
HLCS-201ENST00000336648 PHLDA1Q8WV24 401 aaPredicted RBP11.2□□□□□ -0.62
HLCS-201ENST00000336648 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 RTN4RQ9BZR6 473 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 SH3BGRL3Q9H299 93 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 TMEM229AB2RXF0 380 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 H0YL77 283 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 TGFAP01135 160 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 RIPPLY3P57055 190 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 SLC25A38Q96DW6 304 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 FSCN3Q9NQT6 498 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 ARAP2Q8WZ64 1704 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 IGKV3OR2-268A0A0C4DH90 116 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 C9orf172C9J069 976 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 HBBP68871 147 aa11.2□□□□□ -0.62
HLCS-201ENST00000336648 ATP5LO75964 103 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 SPINK2P20155 84 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 C2orf68Q2NKX9 166 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 SLC25A53Q5H9E4 307 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 APCDD1LQ8NCL9 501 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 CENPVL1A0A0U1RR11 272 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 FOXH1O75593 365 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 TMEM187Q14656 261 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 ABHD12Q8N2K0 398 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 GSN-AS1Q9NRJ2 163 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 LHFPL6Q9Y693 200 aa11.19□□□□□ -0.62
HLCS-201ENST00000336648 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms