RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 TMEM242Q9NWH2 141 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 IFNL4K9M1U5 179 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 PAGE4O60829 102 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 NPPCP23582 126 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 C16orf82Q7Z2V1 217 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 OR10D4PQ8NGN7 298 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 ELOVL1Q9BW60 279 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 MRPL37Q9BZE1 423 aaKnown RBP11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 PARLQ9H300 379 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 GNG12Q9UBI6 72 aa11.14□□□□□ -0.63
TUBA1B-201ENST00000332858 TRAV38-1A0A0B4J264 116 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 CGAP01215 116 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 PF4V1P10720 104 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 GZMHP20718 246 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 RPL23P62829 140 aaKnown RBP11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 DEFB109BQ30KR1 87 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 IGFL2Q6UWQ7 119 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 GCSAMQ8N6F7 178 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 GAR1Q9NY12 217 aaKnown RBP11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 SPINT2O43291 252 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 IFNA1P01562 189 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 FTH1P19P0C7X4 201 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 ZNF83P51522 516 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 ATP6V1FQ16864 119 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 MORN2Q502X0 79 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 MBNL2Q5VZF2 373 aaKnown RBP11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 ZNF66Q6ZN08 573 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 HIST3H2BBQ8N257 126 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 OR51G1Q8NGK1 321 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 AURKAIP1Q9NWT8 199 aaPredicted RBP11.13□□□□□ -0.63
TUBA1B-201ENST00000332858 TRAV17A0A0B4J275 112 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 SMAD7O15105 426 aaKnown RBP11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 SLC31A2O15432 143 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 KBTBD11O94819 623 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 GPR12P47775 334 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 PSMB3P49720 205 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 DUX4L9Q6RFH8 374 aaPredicted RBP11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 VHLLQ6RSH7 139 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 CYP2G1PQ6ZSU1 146 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 C1orf162Q8NEQ5 155 aaPredicted RBP11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 SARAFQ96BY9 339 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 OR6C3Q9NZP0 311 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 NAT8Q9UHE5 227 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 ARFGEF3Q5TH69 2177 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 TACC2O95359 2948 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 RRHO14718 337 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 PCP4P48539 62 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 VWC2Q2TAL6 325 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 FAM90A1Q86YD7 464 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 SNX22Q96L94 193 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 M0R1X1 148 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 CRYAAP02489 173 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 PFN1P07737 140 aaKnown RBP11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 EDDM3BP56851 147 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 LOXL3P58215 753 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 NKX6-1P78426 367 aaPredicted RBP11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 HTD2P86397 168 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 PMS2P11Q13670 270 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 BSXQ3C1V8 233 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 BHLHA15Q7RTS1 189 aaPredicted RBP11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 OR5T1Q8NG75 326 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 SLC25A15Q9Y619 301 aa11.12□□□□□ -0.63
TUBA1B-201ENST00000332858 SRRM5B3KS81 715 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 S100PP25815 95 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 GNB2P62879 340 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 PIP4P1Q86T03 277 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 MOGAT3Q86VF5 341 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 ABHD12Q8N2K0 398 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 OR2V2Q96R30 315 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 ACTR3CQ9C0K3 210 aaPredicted RBP11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 PROCRQ9UNN8 238 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 YLPM1P49750 1951 aaKnown RBP11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 PPP1R2P9O14990 202 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 S100A2P29034 98 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 UBE2G2P60604 165 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 ZNF709Q8N972 641 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 TMEM170AQ8WVE7 144 aa11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 CIB3Q96Q77 187 aaPredicted RBP11.11□□□□□ -0.63
TUBA1B-201ENST00000332858 ZNF891A8MT65 544 aaPredicted RBP11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 SEC14L6B5MCN3 397 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 OPN1MWP04001 364 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 ADH4P08319 380 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 OPN1MW2P0DN77 364 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 OPN1MW3P0DN78 364 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 FABP4P15090 132 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 TUBG1P23258 451 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 CD1BP29016 333 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 OR13D1Q8NGV5 346 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 OR4X1Q8NH49 305 aa11.1□□□□□ -0.63
TUBA1B-201ENST00000332858 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms