RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TGFBR3Q03167 851 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 KRTCAP3Q53RY4 240 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 GCSAMLQ5JQS6 135 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 WDR73Q6P4I2 378 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 LRP11Q86VZ4 500 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 OR2M7Q8NG81 312 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 OR1L6Q8NGR2 347 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 DOCK11Q5JSL3 2073 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 CHD8Q9HCK8 2581 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 USF3Q68DE3 2245 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 GTF3C1Q12789 2109 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 A0A0G2JMM0 328 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 SCO2A0A1W2PP80 73 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 A0A1W2PPB8 328 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 A0A1W2PRS3 328 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 KIR3DP1A8MWS1 328 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 K7EN84 100 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 TCF21O43680 179 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 ZNF253O75346 499 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 NEURL1O76050 574 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 CCL2P13500 99 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 GFRA1P56159 465 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 KLF3P57682 345 aaPredicted RBP9.41□□□□□ -0.9
GINS3-202ENST00000328514 RBX1P62877 108 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
GINS3-202ENST00000328514 PSG7Q13046 419 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 IL11RAQ14626 422 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 PDLIM3Q53GG5 364 aaPredicted RBP9.41□□□□□ -0.9
GINS3-202ENST00000328514 SPATA46Q5T0L3 261 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 H2BFWTQ7Z2G1 175 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 TAAR6Q96RI8 345 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 LAMTOR2Q9Y2Q5 125 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 RNF114Q9Y508 228 aa9.41□□□□□ -0.9
GINS3-202ENST00000328514 BRWD1Q9NSI6 2320 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 LY6G6EA0A0G2JKS1 128 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 C20orf202A1L168 122 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 ZNF503-AS2A6NEH8 195 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 NKX6-3A6NJ46 265 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 FAM166BA8MTA8 275 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 F2Z2F3 143 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 HYPMO75409 117 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 P04436 131 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 RAC2P15153 192 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 TFPI2P48307 235 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 MMDQ15546 238 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 IGFBP7Q16270 282 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 BATFQ16520 125 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 RPEL1Q2QD12 228 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 HLA-BQ31612 363 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 MORN2Q502X0 79 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 SPATA45Q537H7 98 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 SAPCD1Q5SSQ6 148 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 MMD2Q8IY49 270 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 STPG4Q8N801 248 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 KCNS1Q96KK3 526 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 OR2D2Q9H210 308 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 NRN1Q9NPD7 142 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 FOXJ2Q9P0K8 574 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 POLDIP2Q9Y2S7 368 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 MRPS16Q9Y3D3 137 aaKnown RBP9.4□□□□□ -0.9
GINS3-202ENST00000328514 U3KQA8 63 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 V9GYV3 84 aa9.4□□□□□ -0.9
GINS3-202ENST00000328514 C17orf98A8MV24 154 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 SNURFLB1AK76 121 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 PRSS46E5RG02 174 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 SIRPB1O00241 398 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 NXPH2O95156 264 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 RFPL3SP0C7P2 107 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 IER3P46695 156 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 PRRX1P54821 245 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 RPL31P62899 125 aaKnown RBP9.39□□□□□ -0.91
GINS3-202ENST00000328514 RPP30P78346 268 aaKnown RBP9.39□□□□□ -0.91
GINS3-202ENST00000328514 CX3CL1P78423 397 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 ZNF816Q0VGE8 651 aaPredicted RBP9.39□□□□□ -0.91
GINS3-202ENST00000328514 TRA2AQ13595 282 aaKnown RBP eCLIP9.39□□□□□ -0.91
GINS3-202ENST00000328514 GUSBP11Q6P575 273 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 TREML4Q6UXN2 200 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 KLHDC1Q8N7A1 406 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 GALMQ96C23 342 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
GINS3-202ENST00000328514 DUSP23Q9BVJ7 150 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 TBL2Q9Y4P3 447 aaKnown RBP9.39□□□□□ -0.91
GINS3-202ENST00000328514 SPEGQ15772 3267 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 A0A096LPE4 126 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 A0A1W2PPZ6 126 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 RRHO14718 337 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 SH2D1BO14796 132 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 IGHV3-9P01782 118 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 OR5G3P0C626 314 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 EDDM3BP56851 147 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 CLDN18P56856 261 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 WIPI1Q5MNZ9 446 aaPredicted RBP9.39□□□□□ -0.91
GINS3-202ENST00000328514 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 C19orf35Q6ZS72 473 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 ASCL5Q7RTU5 278 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 OR2D3Q8NGH3 330 aa9.39□□□□□ -0.91
GINS3-202ENST00000328514 OR2Y1Q8NGV0 311 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms