RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 SNRPCP09234 159 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 CECR9P0C854 216 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 RNF224P0DH78 156 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 SELLP14151 372 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 IER2Q9BTL4 223 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 MANBALQ9NQG1 85 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 MBNL3Q9NUK0 354 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 A0A1B0GUS0 222 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 IFNL4K9M1U5 179 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 AQP7O14520 342 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 TGOLN2O43493 480 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 GPX4P36969 197 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 WDR82Q6UXN9 313 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 UNQ6494/PRO21346Q6UXR6 183 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 MOGAT3Q86VF5 341 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 SGMS2Q8NHU3 365 aa10.77□□□□□ -0.69
HMGCS1-201ENST00000325110 TMEM265A0A087WTH1 108 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 ARL14EPLP0DKL9 152 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 FOXF2Q12947 444 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 LYG1Q8N1E2 194 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 PPP1R35Q8TAP8 253 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 C5orf30Q96GV9 206 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 ZNF318Q5VUA4 2279 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 TRBV24-1A0A075B6N3 115 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 GRIFINA4D1Z8 144 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 GABRA6Q16445 453 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 INO80CQ6PI98 192 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 FDCSPQ8NFU4 85 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 TMEM18Q96B42 140 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 YLPM1P49750 1951 aaKnown RBP10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 AMBPP02760 352 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 COL8A2P25067 703 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 ERVK11-1P61568 191 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 ZNF90Q03938 601 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 TMEM183AQ8IXX5 376 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 ZBTB34Q8NCN2 500 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 SH3BGRL2Q9UJC5 107 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 WIPI2Q9Y4P8 454 aa10.76□□□□□ -0.69
HMGCS1-201ENST00000325110 TRAV3A0A0B4J244 114 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 TMEM210A6NLX4 147 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 IQCF6A8MYZ5 107 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 TMEM250H0YL14 139 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 RRHO14718 337 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 RAB29O14966 203 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 MDS2Q8NDY4 140 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 HSD17B10Q99714 261 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 ZDHHC11Q9H8X9 412 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 SS18L1O75177 396 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 RND2P52198 227 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 PKIAP61925 76 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 DEFB109BQ30KR1 87 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 SLC35E4Q6ICL7 350 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 C9orf106Q8NAJ2 232 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 LRFN3Q9BTN0 628 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 PRDM13Q9H4Q3 707 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 PXMP4Q9Y6I8 212 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 NPIPB11E5RHQ5 1161 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 TDGF1P13385 188 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 CD33P20138 364 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 MAS1LP35410 378 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 RPP30P78346 268 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 SLC35B1P78383 322 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 Q6ZT83 130 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 GUCD1Q96NT3 240 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 PLEKHA3Q9HB20 300 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 OR6C3Q9NZP0 311 aa10.75□□□□□ -0.69
HMGCS1-201ENST00000325110 GATCO43716 136 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 CD59P13987 128 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 BATFQ16520 125 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 FAM122AQ96E09 287 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 GP6Q9HCN6 339 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 OR7C2O60412 319 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 MYOD1P15172 320 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 OR4P4Q8NGL7 312 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 IMMP2LQ96T52 175 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 MS4A5Q9H3V2 200 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 PROCRQ9UNN8 238 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 SCO2A0A1W2PP80 73 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 TNFSF10P50591 281 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 OR2V2Q96R30 315 aa10.74□□□□□ -0.69
HMGCS1-201ENST00000325110 ABCA4P78363 2273 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 SPAARA0A1B0GVQ0 90 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 TCL1AP56279 114 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 GNB2P62879 340 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 RAB31Q13636 194 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 RND1Q92730 232 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 C14orf144Q96I85 54 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 TMEM140Q9NV12 185 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 TIMM9Q9Y5J7 89 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 C15orf62A8K5M9 175 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 SLC17A3O00476 420 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 IL3RAP26951 378 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 CD82P27701 267 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 CNN1P51911 297 aaKnown RBP10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 NUBP1P53384 320 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 GNB1P62873 340 aa10.73□□□□□ -0.69
HMGCS1-201ENST00000325110 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms