RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 A0A1B0GV90 55 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 P2RY6Q15077 328 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 PDPNQ86YL7 162 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 WDFY1Q8IWB7 410 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 FAM216AQ8WUB2 273 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-201ENST00000323668 WFIKKN1Q96NZ8 548 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 TFF3Q07654 80 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 SPEM2Q0P670 501 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 AARDQ4LEZ3 155 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 PQLC2Q6ZP29 291 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 SPSB4Q96A44 273 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 SFRP2Q96HF1 295 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 JPT1Q9UK76 154 aa12.46□□□□□ -0.41
TCOF1-201ENST00000323668 NEURL1O76050 574 aa12.46□□□□□ -0.42
TCOF1-201ENST00000323668 ERVFRD-1P60508 538 aa12.46□□□□□ -0.42
TCOF1-201ENST00000323668 SLC35B1P78383 322 aa12.46□□□□□ -0.42
TCOF1-201ENST00000323668 OR8I2Q8N0Y5 310 aa12.46□□□□□ -0.42
TCOF1-201ENST00000323668 OR2V2Q96R30 315 aa12.46□□□□□ -0.42
TCOF1-201ENST00000323668 GP6Q9HCN6 339 aa12.46□□□□□ -0.42
TCOF1-201ENST00000323668 CLDN18P56856 261 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 C5orf24Q7Z6I8 188 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 FLYWCH2Q96CP2 140 aaKnown RBP12.45□□□□□ -0.42
TCOF1-201ENST00000323668 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 DIRC3C9JPN6 131 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 MKRN2OSH3BPM6 223 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 SMPD2O60906 423 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 LGALS4P56470 323 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 ZFP36L1Q07352 338 aaKnown RBP12.45□□□□□ -0.42
TCOF1-201ENST00000323668 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 PSG7Q13046 419 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 VKORC1L1Q8N0U8 176 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 RND1Q92730 232 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 MRPL18Q9H0U6 180 aaKnown RBP12.45□□□□□ -0.42
TCOF1-201ENST00000323668 VSIRQ9H7M9 311 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 CALYQ9NYX4 217 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 FOXG1P55316 489 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-201ENST00000323668 HGFACQ04756 655 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 IL15RAQ13261 267 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 SMIM15Q7Z3B0 74 aa12.45□□□□□ -0.42
TCOF1-201ENST00000323668 IGKV3D-15A0A087WSY6 115 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 M0R2Z0 102 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 TOX4O94842 621 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 RPLP1P05386 114 aaKnown RBP12.44□□□□□ -0.42
TCOF1-201ENST00000323668 CD55P08174 381 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 IFNL4K9M1U5 179 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 GCSAMQ8N6F7 178 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 ZNF355PQ9NSJ1 428 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 APCSP02743 223 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 MFAP2P55001 183 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 ZNF497Q6ZNH5 498 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 DEFB124Q8NES8 71 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 CA5BP1Q8WTZ4 195 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 SERTM2A0A1B0GWG4 89 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 PRR33A8MZF0 331 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 ATXN7O15265 892 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-201ENST00000323668 C10orf113Q5VZT2 155 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 BET1LQ9NYM9 111 aa12.44□□□□□ -0.42
TCOF1-201ENST00000323668 ACP7Q6ZNF0 438 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 Q6ZT83 130 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 OR1B1Q8NGR6 318 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 LIME1Q9H400 295 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 FOXJ2Q9P0K8 574 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 GRIFINA4D1Z8 144 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 PINLYPA6NC86 204 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 RPL31P62899 125 aaKnown RBP12.43□□□□□ -0.42
TCOF1-201ENST00000323668 SCGB2A2Q13296 93 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 HIST3H2BBQ8N257 126 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 RBP4P02753 201 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 Q6ZS49 121 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 LYPD6Q86Y78 171 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 ITLN1Q8WWA0 313 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 ACP1P24666 158 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 GCHFRP30047 84 aa12.43□□□□□ -0.42
TCOF1-201ENST00000323668 HIST1H1EP10412 219 aaKnown RBP12.42□□□□□ -0.42
TCOF1-201ENST00000323668 OR5I1Q13606 314 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 IBA57Q5T440 356 aaKnown RBP12.42□□□□□ -0.42
TCOF1-201ENST00000323668 SEBOXQ9HB31 216 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-201ENST00000323668 CBLN4Q9NTU7 201 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 PYY3Q5JQD4 70 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 SPSB3Q6PJ21 355 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 FA2HQ7L5A8 372 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 TGIF2LXQ8IUE1 241 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 OR13A1Q8NGR1 328 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 CCL13Q99616 98 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 OPN3Q9H1Y3 402 aaPredicted RBP12.42□□□□□ -0.42
TCOF1-201ENST00000323668 APC2O95996 2303 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 ZNF407Q9C0G0 2248 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 CRYBB3P26998 211 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 WNT5AP41221 380 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 ATP5G3P48201 142 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 ZNF600Q6ZNG1 722 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 MMD2Q8IY49 270 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 HIST1H2BLQ99880 126 aa12.42□□□□□ -0.42
TCOF1-201ENST00000323668 NTN3O00634 580 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-201ENST00000323668 SLC31A2O15432 143 aa12.41□□□□□ -0.42
TCOF1-201ENST00000323668 RSPO1Q2MKA7 263 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms