RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CISD3P0C7P0 127 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 SELENOHQ8IZQ5 122 aaKnown RBP14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 DERL1Q9BUN8 251 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 PGPA6NDG6 321 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 DEFB123Q8N688 67 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 SMIM8Q96KF7 97 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 NCKAP5O14513 1909 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 GCM2O75603 506 aaPredicted RBP14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 FGF5P12034 268 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 HIST1H2BAQ96A08 127 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 EAF1Q96JC9 268 aaPredicted RBP14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 TRBV5-5A0A0J9YX44 114 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 FCGR2BP31994 310 aaPredicted RBP14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 P2RY4P51582 365 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 IFITM3Q01628 133 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 SPINK2P20155 84 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 SIGLEC14Q08ET2 396 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 FBLIM1Q8WUP2 373 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 LINC00470Q9BZP3 86 aa14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 NPDC1Q9NQX5 325 aaPredicted RBP14.55□□□□□ -0.08
SMCHD1-201ENST00000320876 TYMSP04818 313 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 SNRPD3P62318 126 aaKnown RBP14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 ZP4Q12836 540 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 PGPEP1Q9NXJ5 209 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 GPR132Q9UNW8 380 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 EP300Q09472 2414 aaPredicted RBP14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 TRBV20OR9-2A0A075B6H5 130 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 TMEM50AO95807 157 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 MGST3O14880 152 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 ATP5LO75964 103 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 SCTP09683 121 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 C9orf40Q8IXQ3 194 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 GPR146Q96CH1 333 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 PLAC1Q9HBJ0 212 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 FSCN3Q9NQT6 498 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 OR2H2O95918 312 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 ASAH2BP0C7U1 165 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 FGFRL1Q8N441 504 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 APCDD1LQ8NCL9 501 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 PTP4A3O75365 173 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 ZNF146Q15072 292 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 CCL27Q9Y4X3 112 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 A0A1W2PPE3 182 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 NPFFO15130 113 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 LINC01565O15544 149 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 PLAUP00749 431 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 CA7P43166 264 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 PCNX1Q96RV3 2341 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 HRKO00198 91 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 PGLYRP1O75594 196 aaPredicted RBP14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 RECKO95980 971 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 MFAP4P55083 255 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 FOXC1Q12948 553 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 FAM60AQ9NP50 221 aa14.54□□□□□ -0.08
SMCHD1-201ENST00000320876 COL24A1Q17RW2 1714 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 Q6ZS52 159 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 CD8AP01732 235 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 WNT2BQ93097 391 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 PPIAL4EA0A075B759 164 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 PPIAL4DF5H284 164 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 PPIAL4FP0DN26 164 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 LAMTOR1Q6IAA8 161 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 HCP5Q6MZN7 132 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 PPIAL4AQ9Y536 164 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 A0A1B0GW15 77 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 C16orf97H3BN30 126 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 H3BRM9 83 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 H7C1H1 209 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 CRYBB3P26998 211 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 ATP5IP56385 69 aaPredicted RBP14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 TMEM101Q96IK0 257 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 PLXND1Q9Y4D7 1925 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 ZNF658BQ4V348 819 aaPredicted RBP14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 APOBEC4Q8WW27 367 aaKnown RBP14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 SFXN3Q9BWM7 321 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 SPCS1Q9Y6A9 102 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 IFNL4K9M1U5 179 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 TMEM170BQ5T4T1 132 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 RAX2Q96IS3 184 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 TRAV8-6A0A0B4J262 113 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 GPX4P36969 197 aaPredicted RBP14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 FAM74A4Q5TZK3 123 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 SHISA5Q8N114 240 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 SDHCQ99643 169 aaPredicted RBP14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 WNT10AQ9GZT5 417 aa14.53□□□□□ -0.08
SMCHD1-201ENST00000320876 ZNF488Q96MN9 340 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 SPTAN1Q13813 2472 aaKnown RBP14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 IGKV3D-15A0A087WSY6 115 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 TRAV39A0A0B4J263 110 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 IGKV3-15P01624 115 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 CCL3P10147 92 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 CXorf66Q5JRM2 361 aaPredicted RBP14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 SAXO1Q8IYX7 474 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 TRAV9-1A0A075B6T8 112 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 A0A087WWC5 75 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 RFLNBQ8N5W9 214 aa14.52□□□□□ -0.08
SMCHD1-201ENST00000320876 C9orf172C9J069 976 aa14.52□□□□□ -0.09
SMCHD1-201ENST00000320876 ZPLD1Q8TCW7 415 aa14.52□□□□□ -0.09
SMCHD1-201ENST00000320876 RTN4RQ9BZR6 473 aa14.52□□□□□ -0.09
SMCHD1-201ENST00000320876 FMC1Q96HJ9 113 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms