RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 SLC22A5O76082 557 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 IGLV1-40P01703 118 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 HLA-DQB1P01920 261 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 SMIM18P0DKX4 95 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 RRASP10301 218 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 NFYAP23511 347 aaPredicted RBP10.06□□□□□ -0.8
SYCN-201ENST00000318438 DUTP33316 252 aaKnown RBP10.06□□□□□ -0.8
SYCN-201ENST00000318438 ECSCRQ19T08 205 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 C19orf54Q5BKX5 351 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 ZNF562Q6V9R5 426 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 ZNF645Q8N7E2 425 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 MINDY2Q8NBR6 621 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 BEST4Q8NFU0 473 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
SYCN-201ENST00000318438 AUNIPQ9H7T9 357 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 FBXO7Q9Y3I1 522 aa10.06□□□□□ -0.8
SYCN-201ENST00000318438 LINC01619G3V211 115 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 XRCC3O43542 346 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 CA2P00918 260 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 IGLV2-23P01705 113 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 MED14OSP0DP75 135 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 CBX5P45973 191 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 LGALS7P47929 136 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 RAB9AP51151 201 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 ARPC4P59998 168 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 NCS1P62166 190 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 TMEM177Q53S58 311 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 PPP1R27Q86WC6 154 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 HOGA1Q86XE5 327 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 SAMD12Q8N8I0 201 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 S100A16Q96FQ6 103 aaKnown RBP10.05□□□□□ -0.8
SYCN-201ENST00000318438 HARBI1Q96MB7 349 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 RSRP1Q9BUV0 290 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 FOXA2Q9Y261 457 aaPredicted RBP10.05□□□□□ -0.8
SYCN-201ENST00000318438 CEPT1Q9Y6K0 416 aa10.05□□□□□ -0.8
SYCN-201ENST00000318438 MUC4Q99102 2169 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 IGHV4OR15-8A0A075B7B6 117 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 A0A087WW49 117 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 SHOXO15266 292 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 TUSC2O75896 110 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 IGLV1-51P01701 117 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 VBP1P61758 197 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 TMEM267Q0VDI3 215 aaPredicted RBP10.04□□□□□ -0.8
SYCN-201ENST00000318438 AKIRIN2Q53H80 203 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 BVESQ8NE79 360 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 ABHD5Q8WTS1 349 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 CLCC1Q96S66 551 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 NUBP2Q9Y5Y2 271 aa10.04□□□□□ -0.8
SYCN-201ENST00000318438 DNAH6Q9C0G6 4158 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 IGKV1D-13A0A0B4J2D9 117 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 A0A1W2PN81 502 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 LINC00473A8K010 186 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 J3QRK9 145 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 SOX15O60248 233 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 GABARAPO95166 117 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 IGLV2-14P01704 120 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 CRYGBP07316 175 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 IGKV1-13P0DP09 117 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 EGR2P11161 476 aaPredicted RBP10.03□□□□□ -0.8
SYCN-201ENST00000318438 CHRNA7P36544 502 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 TMEM69Q5SWH9 247 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 KCTD9Q7L273 389 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 ANKRD13BQ86YJ7 626 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 OSR1Q8TAX0 266 aaPredicted RBP10.03□□□□□ -0.8
SYCN-201ENST00000318438 SNAPC3Q92966 411 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 CMTM3Q96MX0 182 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 FAM103A1Q9BTL3 118 aaKnown RBP10.03□□□□□ -0.8
SYCN-201ENST00000318438 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
SYCN-201ENST00000318438 A3GALT2U3KPV4 340 aa10.03□□□□□ -0.8
SYCN-201ENST00000318438 NUPR2A6NF83 97 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
SYCN-201ENST00000318438 CRYZL1O95825 349 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 PTHLHP12272 177 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 TAS2R20P59543 309 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 SSBP2P81877 361 aaPredicted RBP10.02□□□□□ -0.81
SYCN-201ENST00000318438 FXYD3Q14802 87 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 MSMO1Q15800 293 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 VMA21Q3ZAQ7 101 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 ACTBL2Q562R1 376 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 UNQ5815/PRO19632Q6UWF5 114 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 ACOT12Q8WYK0 555 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 HSD17B10Q99714 261 aaKnown RBP10.02□□□□□ -0.81
SYCN-201ENST00000318438 MRPS26Q9BYN8 205 aaKnown RBP10.02□□□□□ -0.81
SYCN-201ENST00000318438 IFT46Q9NQC8 304 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 MRPS7Q9Y2R9 242 aaKnown RBP10.02□□□□□ -0.81
SYCN-201ENST00000318438 PRELID3BQ9Y3B1 194 aa10.02□□□□□ -0.81
SYCN-201ENST00000318438 HSPG2P98160 4391 aa10.01□□□□□ -0.81
SYCN-201ENST00000318438 ARPC1BO15143 372 aaKnown RBP10.01□□□□□ -0.81
SYCN-201ENST00000318438 APOA1P02647 267 aa10.01□□□□□ -0.81
SYCN-201ENST00000318438 AADACP22760 399 aa10.01□□□□□ -0.81
SYCN-201ENST00000318438 CD40LGP29965 261 aa10.01□□□□□ -0.81
SYCN-201ENST00000318438 FCGR2CP31995 323 aa10.01□□□□□ -0.81
SYCN-201ENST00000318438 UBE2KP61086 200 aa10.01□□□□□ -0.81
SYCN-201ENST00000318438 EIF4EBP1Q13541 118 aaPredicted RBP10.01□□□□□ -0.81
SYCN-201ENST00000318438 CTF1Q16619 201 aa10.01□□□□□ -0.81
SYCN-201ENST00000318438 CEMP1Q6PRD7 247 aaPredicted RBP10.01□□□□□ -0.81
SYCN-201ENST00000318438 LINC00322Q6ZN03 302 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms