RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 DNAL4O96015 105 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 MRPL16Q9NX20 251 aaKnown RBP11.72□□□□□ -0.53
CLCN6-201ENST00000312413 IDI2-AS1Q9NZ38 188 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 JPT1Q9UK76 154 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 IGKV3D-15A0A087WSY6 115 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 WNT9BO14905 357 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 IGKV3-15P01624 115 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 IFI6P09912 130 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 HOXA5P20719 270 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 MEF2CQ06413 473 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-201ENST00000312413 P2RY6Q15077 328 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 LINC01590Q5TEZ4 76 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 GOLT1AQ6ZVE7 132 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 ITLN1Q8WWA0 313 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 LINC00470Q9BZP3 86 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 IL36BQ9NZH7 164 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 MSGN1A6NI15 193 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 FAM106CPP0CH98 169 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 RELQ04864 619 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-201ENST00000312413 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 FAM214BQ7L5A3 538 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 DDB2Q92466 427 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 PILRAQ9UKJ1 303 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 SEC16AO15027 2179 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 SCN9AQ15858 1988 aa11.72□□□□□ -0.53
CLCN6-201ENST00000312413 TRBV20OR9-2A0A075B6H5 130 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 LINC00587B1AMM8 73 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 TMEM229AB2RXF0 380 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 RRHO14718 337 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 SRP19P09132 144 aaKnown RBP11.71□□□□□ -0.53
CLCN6-201ENST00000312413 GPR6P46095 362 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-201ENST00000312413 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 MAFAQ8NHW3 353 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-201ENST00000312413 ZNF501Q96CX3 271 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-201ENST00000312413 TMEM160Q9NX00 188 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 ATP5IP56385 69 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-201ENST00000312413 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.71□□□□□ -0.53
CLCN6-201ENST00000312413 A0A087WWC5 75 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 H3BTX0 84 aa11.71□□□□□ -0.53
CLCN6-201ENST00000312413 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.54
CLCN6-201ENST00000312413 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.54
CLCN6-201ENST00000312413 ZNF146Q15072 292 aa11.71□□□□□ -0.54
CLCN6-201ENST00000312413 DRAM1Q8N682 238 aa11.71□□□□□ -0.54
CLCN6-201ENST00000312413 THSD7AQ9UPZ6 1657 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 PPP1R17O96001 155 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 GPX4P36969 197 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-201ENST00000312413 EIF4EBP2Q13542 120 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-201ENST00000312413 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 hCG_38984A0A1B0GV85 526 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 PF4V1P10720 104 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 PTGDSP41222 190 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 SAPCD1Q5SSQ6 148 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 RIPPLY2Q5TAB7 128 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 NPIPB3Q92617 1050 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 LDLRAD4O15165 306 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 RAB9AP51151 201 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 FOXL2P58012 376 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 ATRAIDQ6UW56 229 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-201ENST00000312413 PRDM14Q9GZV8 571 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
CLCN6-201ENST00000312413 TNFSF10P50591 281 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 Q5PR19 223 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 OR4C13Q8NGP0 309 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 APC2O95996 2303 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 ZNHIT1O43257 154 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 SHISA3A0PJX4 238 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 GPX1P07203 203 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 IMMP2LQ96T52 175 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 CCDC88CQ9P219 2028 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
CLCN6-201ENST00000312413 IGKV1D-42A0A075B6H8 117 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 IL6RP08887 468 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-201ENST00000312413 ADRA2AP08913 450 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 PSMG4Q5JS54 123 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 JKAMPQ9P055 326 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 A0A1W2PQM1 296 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 SLC17A3O00476 420 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 FGF5P12034 268 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 ALKBH7Q9BT30 221 aaPredicted RBP11.68□□□□□ -0.54
CLCN6-201ENST00000312413 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 COX5BP10606 129 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 VKORC1L1Q8N0U8 176 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 SHISA5Q8N114 240 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 ST6GALNAC6Q969X2 333 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 PRELID3AQ96N28 172 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 SNAI2O43623 268 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 TMEM30BQ3MIR4 351 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 ASPHD2Q6ICH7 369 aa11.68□□□□□ -0.54
CLCN6-201ENST00000312413 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms