RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TMUB2Q71RG4 321 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 OSR1Q8TAX0 266 aaPredicted RBP18.25■□□□□ 0.51
IRF3-201ENST00000309877 RHOVQ96L33 236 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 TMEM140Q9NV12 185 aa18.25■□□□□ 0.51
IRF3-201ENST00000309877 A0A0D9SG52 128 aa18.24■□□□□ 0.51
IRF3-201ENST00000309877 FAM90A9PA6NNJ1 464 aa18.24■□□□□ 0.51
IRF3-201ENST00000309877 SSSCA1O60232 199 aa18.24■□□□□ 0.51
IRF3-201ENST00000309877 ARHGDIBP52566 201 aa18.24■□□□□ 0.51
IRF3-201ENST00000309877 ARL6Q9H0F7 186 aa18.24■□□□□ 0.51
IRF3-201ENST00000309877 S100A11P31949 105 aa18.23■□□□□ 0.51
IRF3-201ENST00000309877 UBE2E1P51965 193 aa18.23■□□□□ 0.51
IRF3-201ENST00000309877 VAMP2P63027 116 aa18.23■□□□□ 0.51
IRF3-201ENST00000309877 ZNF345Q14585 488 aa18.23■□□□□ 0.51
IRF3-201ENST00000309877 TMEM177Q53S58 311 aa18.23■□□□□ 0.51
IRF3-201ENST00000309877 OR4C13Q8NGP0 309 aa18.23■□□□□ 0.51
IRF3-201ENST00000309877 OR4A16Q8NH70 328 aa18.23■□□□□ 0.51
IRF3-201ENST00000309877 RBMXL1Q96E39 390 aaKnown RBP18.23■□□□□ 0.51
IRF3-201ENST00000309877 IGHV3-72A0A0B4J1Y9 119 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 RNF222A6NCQ9 220 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 FAM90A26D6RGX4 464 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 OR9G9P0C7N8 305 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 RPS16P62249 146 aaKnown RBP18.22■□□□□ 0.51
IRF3-201ENST00000309877 OPCMLQ14982 345 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 POU2AF1Q16633 256 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 PRSS57Q6UWY2 283 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 LHFPL4Q7Z7J7 247 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 HARBI1Q96MB7 349 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 ZC4H2Q9NQZ6 224 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 HILPDAQ9Y5L2 63 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 PTPN13Q12923 2485 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 A0A096LNT2 108 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 CHST1O43916 411 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 LOXL1Q08397 574 aaPredicted RBP18.22■□□□□ 0.51
IRF3-201ENST00000309877 LDLRAD2Q5SZI1 272 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 MINOS1Q5TGZ0 78 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 OR4A47Q6IF82 309 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 KCNRGQ8N5I3 272 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 MINOS1-NBL1R4GNA1 71 aa18.22■□□□□ 0.51
IRF3-201ENST00000309877 RNF223E7ERA6 249 aa18.21■□□□□ 0.51
IRF3-201ENST00000309877 P2RY1P47900 373 aa18.21■□□□□ 0.51
IRF3-201ENST00000309877 LINC01356Q8N9X3 169 aa18.21■□□□□ 0.51
IRF3-201ENST00000309877 C1orf159Q96HA4 380 aa18.21■□□□□ 0.51
IRF3-201ENST00000309877 AQP10Q96PS8 301 aa18.21■□□□□ 0.51
IRF3-201ENST00000309877 REG4Q9BYZ8 158 aa18.21■□□□□ 0.51
IRF3-201ENST00000309877 MS4A7Q9GZW8 240 aaPredicted RBP18.21■□□□□ 0.51
IRF3-201ENST00000309877 TRAV20A0A0B4J274 112 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 SRRM4A7MD48 611 aaKnown RBP18.2■□□□□ 0.5
IRF3-201ENST00000309877 SYNGR2O43760 224 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 MED6O75586 246 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 RPL12P30050 165 aaKnown RBP18.2■□□□□ 0.5
IRF3-201ENST00000309877 OR2B8PP59922 312 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 TNFRSF9Q07011 255 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 OR8H3Q8N146 312 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 GON7Q9BXV9 100 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 HSPB7Q9UBY9 170 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 TBL2Q9Y4P3 447 aaKnown RBP18.2■□□□□ 0.5
IRF3-201ENST00000309877 AUP1Q9Y679 476 aa18.2■□□□□ 0.5
IRF3-201ENST00000309877 MSGN1A6NI15 193 aa18.19■□□□□ 0.5
IRF3-201ENST00000309877 HKR1P10072 659 aa18.19■□□□□ 0.5
IRF3-201ENST00000309877 RELBQ01201 579 aa18.19■□□□□ 0.5
IRF3-201ENST00000309877 Q96MF0 132 aa18.19■□□□□ 0.5
IRF3-201ENST00000309877 RAB40CQ96S21 281 aa18.19■□□□□ 0.5
IRF3-201ENST00000309877 QTRT1Q9BXR0 403 aaKnown RBP18.19■□□□□ 0.5
IRF3-201ENST00000309877 HIF1ANQ9NWT6 349 aa18.19■□□□□ 0.5
IRF3-201ENST00000309877 CENPEQ02224 2701 aa18.19■□□□□ 0.5
IRF3-201ENST00000309877 ANKRD17O75179 2603 aaKnown RBP18.19■□□□□ 0.5
IRF3-201ENST00000309877 TRAV3A0A0B4J244 114 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 A0A1W2PPI3 338 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 KANTRA0A1W2PQU2 76 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 OOSP1A8MZH6 123 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 UBE2KP61086 200 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 CCDC144NLQ6NUI1 221 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 C11orf1Q9H5F2 150 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 TIMM23O14925 209 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 GPR137BO60478 399 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 IFNA17P01571 189 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 SAA1P0DJI8 122 aaPredicted RBP18.18■□□□□ 0.5
IRF3-201ENST00000309877 LGALS7P47929 136 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 CAV2P51636 162 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 SSX2Q16385 188 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 GPR157Q5UAW9 335 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 RBKSQ9H477 322 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 SLA2Q9H6Q3 261 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 CACFD1Q9UGQ2 172 aa18.18■□□□□ 0.5
IRF3-201ENST00000309877 MED13LQ71F56 2210 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 IAPPP10997 89 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 GATA3P23771 443 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 RPL23AP62750 156 aaKnown RBP18.17■□□□□ 0.5
IRF3-201ENST00000309877 OR2C3Q8N628 320 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 MAPK1IP1LQ8NDC0 245 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 VSTM2AQ8TAG5 236 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 C7orf69Q9H7B7 122 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 BET1LQ9NYM9 111 aa18.17■□□□□ 0.5
IRF3-201ENST00000309877 POLQO75417 2590 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 CENPVL3A0A0U1RRI6 287 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 CEBPZOSA8MTT3 80 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 UPK2O00526 184 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 BCL2L11O43521 198 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 CD1BP29016 333 aa18.16■□□□□ 0.5
IRF3-201ENST00000309877 IFITM2Q01629 132 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms