RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ACTL6BO94805 426 aa14.96□□□□□ -0.01
LIME1-201ENST00000309546 OR9G9P0C7N8 305 aa14.96□□□□□ -0.01
LIME1-201ENST00000309546 RPL30P62888 115 aaKnown RBP14.96□□□□□ -0.01
LIME1-201ENST00000309546 DYRK1AQ13627 763 aa14.96□□□□□ -0.01
LIME1-201ENST00000309546 CDK10Q15131 360 aa14.96□□□□□ -0.01
LIME1-201ENST00000309546 ADAD2Q8NCV1 583 aaKnown RBP14.96□□□□□ -0.01
LIME1-201ENST00000309546 TCTEX1D2Q8WW35 142 aa14.96□□□□□ -0.01
LIME1-201ENST00000309546 ZNF430Q9H8G1 570 aaPredicted RBP14.96□□□□□ -0.01
LIME1-201ENST00000309546 PEF1Q9UBV8 284 aaKnown RBP14.96□□□□□ -0.01
LIME1-201ENST00000309546 SPATA2Q9UM82 520 aa14.96□□□□□ -0.01
LIME1-201ENST00000309546 TRAV18A0A075B6X5 111 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 SLC22A5O76082 557 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 TRBV12-3P01733 135 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 PRH1P02810 166 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 FRMD6-AS1P0C7T7 363 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 SYNJ2BPP57105 145 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 ARPC4P59998 168 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 C10orf55Q5SWW7 151 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 SBSPONQ8IVN8 264 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 MMD2Q8IY49 270 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 SLC25A38Q96DW6 304 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 USMG5Q96IX5 58 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 ADAM30Q9UKF2 790 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 ETV7Q9Y603 341 aa14.95□□□□□ -0.02
LIME1-201ENST00000309546 RBMXL2O75526 392 aaKnown RBP14.94□□□□□ -0.02
LIME1-201ENST00000309546 BRI3O95415 125 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 IGLV1-51P01701 117 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 IGLV2-14P01704 120 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 ZNF343Q6P1L6 599 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 VKORC1L1Q8N0U8 176 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 BEST4Q8NFU0 473 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 OR9G4Q8NGQ1 327 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 OR4S2Q8NH73 311 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 HSD17B10Q99714 261 aaKnown RBP14.94□□□□□ -0.02
LIME1-201ENST00000309546 TAS2R8Q9NYW2 309 aa14.94□□□□□ -0.02
LIME1-201ENST00000309546 FCER2P06734 321 aa14.93□□□□□ -0.02
LIME1-201ENST00000309546 PTHLHP12272 177 aa14.93□□□□□ -0.02
LIME1-201ENST00000309546 EXOSC2Q13868 293 aaKnown RBP14.93□□□□□ -0.02
LIME1-201ENST00000309546 KLF5Q13887 457 aaPredicted RBP14.93□□□□□ -0.02
LIME1-201ENST00000309546 RPEL1Q2QD12 228 aa14.93□□□□□ -0.02
LIME1-201ENST00000309546 GVQW1Q8N7I0 195 aa14.93□□□□□ -0.02
LIME1-201ENST00000309546 GPHA2Q96T91 129 aa14.93□□□□□ -0.02
LIME1-201ENST00000309546 SPIN2AQ99865 258 aa14.93□□□□□ -0.02
LIME1-201ENST00000309546 SPIN2BQ9BPZ2 258 aa14.93□□□□□ -0.02
LIME1-201ENST00000309546 HUWE1Q7Z6Z7 4374 aaKnown RBP14.92□□□□□ -0.02
LIME1-201ENST00000309546 SCAND1P57086 179 aa14.92□□□□□ -0.02
LIME1-201ENST00000309546 RHOGP84095 191 aa14.92□□□□□ -0.02
LIME1-201ENST00000309546 SECTM1Q8WVN6 248 aa14.92□□□□□ -0.02
LIME1-201ENST00000309546 RCHY1Q96PM5 261 aa14.92□□□□□ -0.02
LIME1-201ENST00000309546 AKIP1Q9NQ31 210 aa14.92□□□□□ -0.02
LIME1-201ENST00000309546 NBEAL2Q6ZNJ1 2754 aa14.92□□□□□ -0.02
LIME1-201ENST00000309546 FAM223BA6NKX1 122 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 TNFSF12O43508 249 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 KBTBD11O94819 623 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 OR2A4O95047 310 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 FCGR2CP31995 323 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 ZNF45Q02386 682 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 TATDN3Q17R31 274 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 KCTD21Q4G0X4 260 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 FAM223AQ8IWN6 122 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 MFSD4AQ8N468 514 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 OR13F1Q8NGS4 319 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 OR2A7Q96R45 310 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 CCL28Q9NRJ3 127 aa14.91□□□□□ -0.02
LIME1-201ENST00000309546 HMX3A6NHT5 357 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 ATP5G2Q06055 141 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 EIF4EBP1Q13541 118 aaPredicted RBP14.9□□□□□ -0.02
LIME1-201ENST00000309546 ZNF66Q6ZN08 573 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 SSX9Q7RTT3 188 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 HOGA1Q86XE5 327 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 SGPP2Q8IWX5 399 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 VSTM2AQ8TAG5 236 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 SNAPC3Q92966 411 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 FYTTD1Q96QD9 318 aaKnown RBP14.9□□□□□ -0.02
LIME1-201ENST00000309546 DIABLOQ9NR28 239 aa14.9□□□□□ -0.02
LIME1-201ENST00000309546 A0A0A6YYH2 397 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 DPPA5A6NC42 116 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 A6NJ64 397 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 OR2J3O76001 311 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 PPYP01298 95 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 TGFBR1P36897 503 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 RPL27AP46776 148 aaKnown RBP14.89□□□□□ -0.03
LIME1-201ENST00000309546 FXYD4P59646 89 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 IL34Q6ZMJ4 242 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 TTC9CQ8N5M4 171 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 AUNIPQ9H7T9 357 aa14.89□□□□□ -0.03
LIME1-201ENST00000309546 TRBV9A0A0B4J1U6 114 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 MEIS3P1A6NDR6 274 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 H0Y980 276 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 IGHV4-30-4P0DP06 118 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 KIR2DS2P43631 304 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 BRWD1-AS2P59051 145 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 C19orf35Q6ZS72 473 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 SLC25A42Q86VD7 318 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 TMEM167AQ8TBQ9 72 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 SLC5A7Q9GZV3 580 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 ZMAT4Q9H898 229 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 TENM3Q9P273 2699 aa14.88□□□□□ -0.03
LIME1-201ENST00000309546 TEX22C9J3V5 150 aa14.87□□□□□ -0.03
LIME1-201ENST00000309546 HRASP01112 189 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms