RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 SHANK1Q9Y566 2161 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 RPS10-NUDT3A0A1W2PQS6 291 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 MPDU1O75352 247 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 COL8A2P25067 703 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 HTR1DP28221 377 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 ETFRF1Q6IPR1 90 aa12.88□□□□□ -0.35
CGGBP1-201ENST00000309534 KIAA2026Q5HYC2 2103 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 M0R036 132 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 ELLP55199 621 aaPredicted RBP12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 PCGF1Q9BSM1 259 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 LYNX1G3V0Z9 82 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 LYNX1P0DP58 116 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 RPL8P62917 257 aaKnown RBP12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 WDR25Q64LD2 544 aaPredicted RBP12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 LYPD2Q6UXB3 125 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 S100A7AQ86SG5 101 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 DMRTC2Q8IXT2 367 aaPredicted RBP12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 OR5B3Q8NH48 314 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 DCAF16Q9NXF7 216 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 RBP4P02753 201 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 IGHV1-8P0DP01 117 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 SLC24A4Q8NFF2 622 aa12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 PATZ1Q9HBE1 687 aaKnown RBP12.87□□□□□ -0.35
CGGBP1-201ENST00000309534 REG1BP48304 166 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 MMD2Q8IY49 270 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 A6NNC1 897 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 ARG1P05089 322 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 DVL1P1P54792 670 aaPredicted RBP12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 HOXA4Q00056 320 aaPredicted RBP12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 SPINK9Q5DT21 86 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 ITLN2Q8WWU7 325 aaPredicted RBP12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 PSMG3Q9BT73 122 aaPredicted RBP12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 CYTL1Q9NRR1 136 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 FSTL3O95633 263 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 FABP1P07148 127 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 BRS3P32247 399 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 LOXL3P58215 753 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 LINC00311Q8N616 119 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 C8orf31Q8N9H6 132 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 GGACTQ9BVM4 153 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 ROS1P08922 2347 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 OR4A47Q6IF82 309 aa12.86□□□□□ -0.35
CGGBP1-201ENST00000309534 CDKN1AP38936 164 aa12.85□□□□□ -0.35
CGGBP1-201ENST00000309534 ZNF787Q6DD87 383 aa12.85□□□□□ -0.35
CGGBP1-201ENST00000309534 MRPL20Q9BYC9 149 aaKnown RBP12.85□□□□□ -0.35
CGGBP1-201ENST00000309534 LINC00473A8K010 186 aa12.85□□□□□ -0.35
CGGBP1-201ENST00000309534 DANCRP0C864 163 aa12.85□□□□□ -0.35
CGGBP1-201ENST00000309534 C1RLQ9NZP8 487 aa12.85□□□□□ -0.35
CGGBP1-201ENST00000309534 TIMM9Q9Y5J7 89 aa12.85□□□□□ -0.35
CGGBP1-201ENST00000309534 PLCE1Q9P212 2302 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 M0R1W7 72 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 SPP1P10451 314 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 LOXP28300 417 aaPredicted RBP12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 TMEM204Q9BSN7 226 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 IGF2RP11717 2491 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 MFSD2BA6NFX1 497 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 C15orf61A6NNL5 157 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 RNASEK-C17orf49H0YIS7 233 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 PSMB3P49720 205 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 ARF6P62330 175 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 PNKDQ8N490 385 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 SMDT1Q9H4I9 107 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 GNB1P62873 340 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 FFAR4Q5NUL3 377 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 BTNL8Q6UX41 500 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 DPM3Q9P2X0 92 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 SLC31A2O15432 143 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 FGF16O43320 207 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 UQCRFS1P47985 274 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 GUK1Q16774 197 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 TMEM41BQ5BJD5 291 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 SOHLH1Q5JUK2 328 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 LPAR2Q9HBW0 351 aa12.84□□□□□ -0.35
CGGBP1-201ENST00000309534 PRR14LQ5THK1 2151 aa12.83□□□□□ -0.35
CGGBP1-201ENST00000309534 UPK2O00526 184 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 S100A7P31151 101 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 DUX4L9Q6RFH8 374 aaPredicted RBP12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 TAF15Q92804 592 aaKnown RBP eCLIP12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 AGMATQ9BSE5 352 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 BET1LQ9NYM9 111 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 IGHV2-70P01814 119 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 CD1BP29016 333 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 COMPP49747 757 aaPredicted RBP12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 DLK1P80370 383 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 ZNF429Q86V71 674 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 PKDREJQ9NTG1 2253 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 DEFA4P12838 97 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 ATP5J2P56134 94 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 OR4C12Q96R67 309 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 ZNF257Q9Y2Q1 563 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 NBASA2RRP1 2371 aa12.83□□□□□ -0.36
CGGBP1-201ENST00000309534 A0A0G2JRQ6 117 aa12.82□□□□□ -0.36
CGGBP1-201ENST00000309534 DTX2Q86UW9 622 aa12.82□□□□□ -0.36
CGGBP1-201ENST00000309534 NPVFQ9HCQ7 196 aa12.82□□□□□ -0.36
CGGBP1-201ENST00000309534 IGKV1-39P01597 117 aa12.82□□□□□ -0.36
CGGBP1-201ENST00000309534 IGKV1D-39P04432 117 aa12.82□□□□□ -0.36
CGGBP1-201ENST00000309534 TNXAQ16473 311 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms