RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SH2D2AQ9NP31 389 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 DCAF16Q9NXF7 216 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 KIR2DL5BA0A0G2JN68 375 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 KIR2DL5BA0A0G2JPC4 375 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 PMCHP20382 165 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 RPL15P61313 204 aaKnown RBP9.36□□□□□ -0.91
PTPN7-201ENST00000309017 EDDM3AQ14507 147 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 MIC13Q5XKP0 118 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 Q6P435 159 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 KIR2DL5AQ8N109 375 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 R3HDM4Q96D70 268 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 ZNF586Q9NXT0 402 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 HAND1O96004 215 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 PAFAH1B2P68402 229 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
PTPN7-201ENST00000309017 ARSJQ5FYB0 599 aaPredicted RBP9.36□□□□□ -0.91
PTPN7-201ENST00000309017 Q8IYB0 196 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 MIEN1Q9BRT3 115 aa9.36□□□□□ -0.91
PTPN7-201ENST00000309017 TRAV34A0A0B4J273 112 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 IGHV3-13P01766 116 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 IGHV3-7P01780 117 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 HBZP02008 142 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 SLC35B1P78383 322 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 DCAF10Q5QP82 559 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 DMRTA1Q5VZB9 504 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 SAP25Q8TEE9 199 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 TAAR6Q96RI8 345 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 QTRT1Q9BXR0 403 aaKnown RBP9.35□□□□□ -0.91
PTPN7-201ENST00000309017 GCM1Q9NP62 436 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 SPTBN4Q9H254 2564 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 MARCH11A6NNE9 402 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 C12orf77C9JDV5 145 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 FCGR3BO75015 233 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 CD99P14209 185 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 CDKN1AP38936 164 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 AMTP48728 403 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 FOXL1Q12952 345 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 ABHD17BQ5VST6 288 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 Q6ZWC4 215 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 OCC1Q8TAD7 63 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 NANOS1Q8WY41 292 aaKnown RBP9.35□□□□□ -0.91
PTPN7-201ENST00000309017 TMEM45BQ96B21 275 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 HES7Q9BYE0 225 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 OR2J1Q9GZK6 312 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 PRDM6Q9NQX0 595 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 SERTAD4Q9NUC0 356 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 NPIPB11E5RHQ5 1161 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 CLDN14O95500 239 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 TFF1P04155 84 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 RPP30P78346 268 aaKnown RBP9.35□□□□□ -0.91
PTPN7-201ENST00000309017 MRPL49Q13405 166 aaKnown RBP9.35□□□□□ -0.91
PTPN7-201ENST00000309017 NRN1LQ496H8 165 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 LINC00696Q6ZRV3 163 aa9.35□□□□□ -0.91
PTPN7-201ENST00000309017 CACNA1AO00555 2505 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 LY6G6EA0A0G2JKS1 128 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 MLNRO43193 412 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 TCF21O43680 179 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 NEURL1O76050 574 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 ACTL6BO94805 426 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 MAGEA5P43359 124 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 TCL1AP56279 114 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 ERVK-16P61578 105 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 SUMO1P63165 101 aaKnown RBP9.34□□□□□ -0.91
PTPN7-201ENST00000309017 TBC1D28Q2M2D7 210 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 ZNF826PQ6ZT77 177 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 MDP1Q86V88 176 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 GNG12Q9UBI6 72 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 U3KQA8 63 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 RAB29O14966 203 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 TNFSF13O75888 250 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 NTF3P20783 257 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 ZBTB34Q8NCN2 500 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 DIRC2Q96SL1 478 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 LINC00470Q9BZP3 86 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 SVILO95425 2214 aa9.34□□□□□ -0.91
PTPN7-201ENST00000309017 SMG1Q96Q15 3661 aaKnown RBP9.34□□□□□ -0.91
PTPN7-201ENST00000309017 AQP7O14520 342 aa9.34□□□□□ -0.92
PTPN7-201ENST00000309017 MT-CO2P00403 227 aa9.34□□□□□ -0.92
PTPN7-201ENST00000309017 BTF3P20290 206 aaKnown RBP9.34□□□□□ -0.92
PTPN7-201ENST00000309017 RPL31P62899 125 aaKnown RBP9.34□□□□□ -0.92
PTPN7-201ENST00000309017 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.92
PTPN7-201ENST00000309017 OR8I2Q8N0Y5 310 aa9.34□□□□□ -0.92
PTPN7-201ENST00000309017 DIRC3C9JPN6 131 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 WNT9BO14905 357 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 SIAH2O43255 324 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 CXorf1O96002 111 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 SSTR5P35346 364 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 TIMP3P35625 211 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 UBE2NP61088 152 aaKnown RBP9.33□□□□□ -0.92
PTPN7-201ENST00000309017 VKORC1L1Q8N0U8 176 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 C11orf42Q8N5U0 333 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 PSPNO60542 156 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 GPR12P47775 334 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 GFRA1P56159 465 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 Q0VFX4 171 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 RPEL1Q2QD12 228 aa9.33□□□□□ -0.92
PTPN7-201ENST00000309017 ALKBH2Q6NS38 261 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms