RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 MMP9P14780 707 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 USF1P22415 310 aaPredicted RBP10.52□□□□□ -0.72
CCDC7-202ENST00000302316 HTR1DP28221 377 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 RAB13P51153 203 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 PDPNQ86YL7 162 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 LRRC75A-AS1Q8N1F1 130 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.52□□□□□ -0.72
CCDC7-202ENST00000302316 WASHC3Q9Y3C0 194 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 INSIG2Q9Y5U4 225 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 ABCA12Q86UK0 2595 aa10.52□□□□□ -0.72
CCDC7-202ENST00000302316 IGHV1-3A0A0C4DH29 117 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 FAM90A9PA6NNJ1 464 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 FAM90A26D6RGX4 464 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 SHOXO15266 292 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 BCL2L11O43521 198 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 HKR1P10072 659 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 RPL12P30050 165 aaKnown RBP10.52□□□□□ -0.73
CCDC7-202ENST00000302316 P2RY1P47900 373 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 OR2B8PP59922 312 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 OSR1Q8TAX0 266 aaPredicted RBP10.52□□□□□ -0.73
CCDC7-202ENST00000302316 FLYWCH2Q96CP2 140 aaKnown RBP10.52□□□□□ -0.73
CCDC7-202ENST00000302316 HARBI1Q96MB7 349 aa10.52□□□□□ -0.73
CCDC7-202ENST00000302316 IGHV3-72A0A0B4J1Y9 119 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 LEUTXA8MZ59 168 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 SYNGR2O43760 224 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 CHST1O43916 411 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 MC5RP33032 325 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 CEACAM3P40198 252 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 CAV2P51636 162 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 POU2AF1Q16633 256 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 TMEM177Q53S58 311 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 TPTE2P1Q5T6R2 138 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 OR4A47Q6IF82 309 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 MOB3BQ86TA1 216 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 OR4C13Q8NGP0 309 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 OR4A16Q8NH70 328 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 LHX4Q969G2 390 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 TBX15Q96SF7 602 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 C11orf1Q9H5F2 150 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 DPM3Q9P2X0 92 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 VPS13CQ709C8 3753 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 ABCA2Q9BZC7 2435 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 GCN1Q92616 2671 aaKnown RBP10.51□□□□□ -0.73
CCDC7-202ENST00000302316 LY6LH3BQJ8 138 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 IAPPP10997 89 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 ARHGDIBP52566 201 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 OR2C3Q8N628 320 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 RAB40CQ96S21 281 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 ARPC5LQ9BPX5 153 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 AIFM2Q9BRQ8 373 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 HSPB7Q9UBY9 170 aa10.51□□□□□ -0.73
CCDC7-202ENST00000302316 MED13LQ71F56 2210 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 TRAV3A0A0B4J244 114 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 SRRM4A7MD48 611 aaKnown RBP10.5□□□□□ -0.73
CCDC7-202ENST00000302316 GPR137BO60478 399 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 UBE2KP61086 200 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 Q5PR19 223 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 LHFPL4Q7Z7J7 247 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 OR8H1Q8NGG4 311 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 QTRT1Q9BXR0 403 aaKnown RBP10.5□□□□□ -0.73
CCDC7-202ENST00000302316 LYRM2Q9NU23 88 aaPredicted RBP10.5□□□□□ -0.73
CCDC7-202ENST00000302316 NAV2Q8IVL1 2488 aa10.5□□□□□ -0.73
CCDC7-202ENST00000302316 A0A1W2PPI3 338 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 RGS13O14921 159 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 MED6O75586 246 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 TMEM50AO95807 157 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 MSMBP08118 114 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 SAA1P0DJI8 122 aaPredicted RBP10.49□□□□□ -0.73
CCDC7-202ENST00000302316 LGALS4P56470 323 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 RPS16P62249 146 aaKnown RBP10.49□□□□□ -0.73
CCDC7-202ENST00000302316 RELBQ01201 579 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 ZNF471Q9BX82 626 aaPredicted RBP10.49□□□□□ -0.73
CCDC7-202ENST00000302316 MS4A7Q9GZW8 240 aaPredicted RBP10.49□□□□□ -0.73
CCDC7-202ENST00000302316 RBKSQ9H477 322 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 HILPDAQ9Y5L2 63 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 FAM24AA6NFZ4 105 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 C15orf61A6NNL5 157 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 H3BP45 60 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 UBE2E1P51965 193 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 PAX9P55771 341 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 RPL23AP62750 156 aaKnown RBP10.49□□□□□ -0.73
CCDC7-202ENST00000302316 PAX8Q06710 450 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 GPR157Q5UAW9 335 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 SLC51BQ86UW2 128 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 MBD6Q96DN6 1003 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 APCP25054 2843 aa10.49□□□□□ -0.73
CCDC7-202ENST00000302316 A0A096LNT2 108 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 CEBPZOSA8MTT3 80 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 B4DSR2 109 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 TIMM23O14925 209 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 IFNA17P01571 189 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 EWSR1Q01844 656 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC7-202ENST00000302316 AARDQ4LEZ3 155 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 SPINK9Q5DT21 86 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 MINOS1Q5TGZ0 78 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 TEX261Q6UWH6 196 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 CLEC9AQ6UXN8 241 aa10.48□□□□□ -0.73
CCDC7-202ENST00000302316 OR8H3Q8N146 312 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms