RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 OR4A47Q6IF82 309 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 STPG2Q8N412 459 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 MARC2Q969Z3 335 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 TMEM186Q96B77 213 aa18.15■□□□□ 0.5
SMAD1-201ENST00000302085 SRRM4A7MD48 611 aaKnown RBP18.14■□□□□ 0.49
SMAD1-201ENST00000302085 DFFBO76075 338 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 HRASP01112 189 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 SPCS3P61009 180 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 ZNF525Q8N782 197 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 OR5AN1Q8NGI8 311 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 OR13D1Q8NGV5 346 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 OR52E5Q8NH55 327 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 CACFD1Q9UGQ2 172 aa18.14■□□□□ 0.49
SMAD1-201ENST00000302085 C22orf46C9J442 243 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 H0YJW9 148 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 IFNA17P01571 189 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 ZNF137PP52743 207 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 BLOC1S1P78537 153 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 DHRS7BQ6IAN0 325 aaPredicted RBP18.13■□□□□ 0.49
SMAD1-201ENST00000302085 CIB3Q96Q77 187 aaPredicted RBP18.13■□□□□ 0.49
SMAD1-201ENST00000302085 NARFLQ9H6Q4 476 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 A0A1W2PPH5 198 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 IL6RP08887 468 aaPredicted RBP18.13■□□□□ 0.49
SMAD1-201ENST00000302085 EFNA4P52798 201 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 PRB3Q04118 309 aaPredicted RBP18.13■□□□□ 0.49
SMAD1-201ENST00000302085 PDLIM3Q53GG5 364 aaPredicted RBP18.13■□□□□ 0.49
SMAD1-201ENST00000302085 FAM71F2Q6NXP2 309 aa18.13■□□□□ 0.49
SMAD1-201ENST00000302085 STRAPQ9Y3F4 350 aaKnown RBP18.13■□□□□ 0.49
SMAD1-201ENST00000302085 HBG1P69891 147 aa18.12■□□□□ 0.49
SMAD1-201ENST00000302085 HBG2P69892 147 aa18.12■□□□□ 0.49
SMAD1-201ENST00000302085 BTNL8Q6UX41 500 aa18.12■□□□□ 0.49
SMAD1-201ENST00000302085 ZNF429Q86V71 674 aa18.12■□□□□ 0.49
SMAD1-201ENST00000302085 TSNAXQ99598 290 aaKnown RBP18.12■□□□□ 0.49
SMAD1-201ENST00000302085 NABP2Q9BQ15 211 aa18.12■□□□□ 0.49
SMAD1-201ENST00000302085 HRH4Q9H3N8 390 aa18.12■□□□□ 0.49
SMAD1-201ENST00000302085 PARP11Q9NR21 331 aa18.12■□□□□ 0.49
SMAD1-201ENST00000302085 IGHV2-26A0A0B4J1V2 119 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 PMS2P5A8MQ11 134 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 C1QL1O75973 258 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 RBP4P02753 201 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 GPR6P46095 362 aaPredicted RBP18.11■□□□□ 0.49
SMAD1-201ENST00000302085 GNB2P62879 340 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 OR8G2PQ6IF36 304 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 Q6ZRG5 221 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 OR2G3Q8NGZ4 309 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 DCHS2Q6V1P9 2916 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 C15orf61A6NNL5 157 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 IFNA5P01569 189 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 RUNX1Q01196 453 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 TMEM182Q6ZP80 229 aaPredicted RBP18.11■□□□□ 0.49
SMAD1-201ENST00000302085 ZNF843Q8N446 348 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 LINC00052Q96N35 136 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 NUP50Q9UKX7 468 aa18.11■□□□□ 0.49
SMAD1-201ENST00000302085 OVOL3O00110 214 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 APOA2P02652 100 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 LIPFP07098 398 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 VDAC2P45880 294 aaPredicted RBP18.1■□□□□ 0.49
SMAD1-201ENST00000302085 FHITP49789 147 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 TAGLNQ01995 201 aaKnown RBP18.1■□□□□ 0.49
SMAD1-201ENST00000302085 GNPNAT1Q96EK6 184 aaPredicted RBP18.1■□□□□ 0.49
SMAD1-201ENST00000302085 MMP26Q9NRE1 261 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 TMEM14BQ9NUH8 114 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 RAB19A4D1S5 217 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 H7C2Y5 167 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 IGLV1-47P01700 117 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 RAB5CP51148 216 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 PRRX1P54821 245 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 RPS16P62249 146 aaKnown RBP18.1■□□□□ 0.49
SMAD1-201ENST00000302085 SLC38A11Q08AI6 406 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 TNFRSF14Q92956 283 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 SSBP3Q9BWW4 388 aaPredicted RBP18.1■□□□□ 0.49
SMAD1-201ENST00000302085 TCF19Q9Y242 345 aa18.1■□□□□ 0.49
SMAD1-201ENST00000302085 FOXA2Q9Y261 457 aaPredicted RBP18.1■□□□□ 0.49
SMAD1-201ENST00000302085 TET2Q6N021 2002 aaPredicted RBP18.09■□□□□ 0.49
SMAD1-201ENST00000302085 UPK2O00526 184 aa18.09■□□□□ 0.49
SMAD1-201ENST00000302085 TMEM177Q53S58 311 aa18.09■□□□□ 0.49
SMAD1-201ENST00000302085 LILRB2Q8N423 598 aa18.09■□□□□ 0.49
SMAD1-201ENST00000302085 Q8N7P7 452 aa18.09■□□□□ 0.49
SMAD1-201ENST00000302085 OSR1Q8TAX0 266 aaPredicted RBP18.09■□□□□ 0.49
SMAD1-201ENST00000302085 ONECUT1Q9UBC0 465 aa18.09■□□□□ 0.49
SMAD1-201ENST00000302085 C15orf62A8K5M9 175 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 NUDT19A8MXV4 375 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 SHOXO15266 292 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 LRRC75BQ2VPJ9 315 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 HLA-DRB5Q30154 266 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 THNSL2Q86YJ6 484 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 TGIF2LXQ8IUE1 241 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 LYPD6BQ8NI32 183 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 LHX4Q969G2 390 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 CLEC7AQ9BXN2 247 aa18.08■□□□□ 0.49
SMAD1-201ENST00000302085 LOC105371242A0A075B767 164 aa18.08■□□□□ 0.48
SMAD1-201ENST00000302085 ARG1P05089 322 aa18.08■□□□□ 0.48
SMAD1-201ENST00000302085 MYOD1P15172 320 aa18.08■□□□□ 0.48
SMAD1-201ENST00000302085 IL3RAP26951 378 aa18.08■□□□□ 0.48
SMAD1-201ENST00000302085 HSPE1P61604 102 aaKnown RBP18.08■□□□□ 0.48
SMAD1-201ENST00000302085 PJVKQ0ZLH3 352 aa18.08■□□□□ 0.48
SMAD1-201ENST00000302085 FLYWCH2Q96CP2 140 aaKnown RBP18.08■□□□□ 0.48
SMAD1-201ENST00000302085 LY86O95711 162 aa18.07■□□□□ 0.48
SMAD1-201ENST00000302085 PRH1P02810 166 aa18.07■□□□□ 0.48
SMAD1-201ENST00000302085 ZP3P21754 424 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms