RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 CEACAM8P31997 349 aaPredicted RBP18.25■□□□□ 0.51
TPM4-201ENST00000300933 CCKARP32238 428 aa18.25■□□□□ 0.51
TPM4-201ENST00000300933 EDDM3BP56851 147 aa18.25■□□□□ 0.51
TPM4-201ENST00000300933 OR10A7Q8NGE5 316 aa18.25■□□□□ 0.51
TPM4-201ENST00000300933 IL22RA2Q969J5 263 aa18.25■□□□□ 0.51
TPM4-201ENST00000300933 SDF2L1Q9HCN8 221 aa18.25■□□□□ 0.51
TPM4-201ENST00000300933 CHD8Q9HCK8 2581 aa18.25■□□□□ 0.51
TPM4-201ENST00000300933 C17orf98A8MV24 154 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 EREGO14944 169 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 METTL15P1P0C7V9 234 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 BCL2P10415 239 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 PAX1P15863 534 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 G0S2P27469 103 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 GLRXP35754 106 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 PLA2G5P39877 138 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 RPS16P62249 146 aaKnown RBP18.24■□□□□ 0.51
TPM4-201ENST00000300933 SSX7Q7RTT5 188 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 LEAP2Q969E1 77 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 NEU1Q99519 415 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 FAM234AQ9H0X4 552 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 DUXBA0A1W2PPF3 345 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 CEBPZOSA8MTT3 80 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 FAM87AP0C7U9 286 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 BRWD1-AS2P59051 145 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 ADIRFQ15847 76 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 KRTCAP3Q53RY4 240 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 WFDC8Q8IUA0 241 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 SFXN3Q9BWM7 321 aa18.24■□□□□ 0.51
TPM4-201ENST00000300933 XKRY2A2RUG3 117 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 DVL1O14640 695 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 ZNF737O75373 536 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 PNRC1Q12796 327 aaPredicted RBP18.23■□□□□ 0.51
TPM4-201ENST00000300933 ZNF645Q8N7E2 425 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 OR1P1Q8NH06 330 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 NDUFAF3Q9BU61 184 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 LIN7CQ9NUP9 197 aaKnown RBP18.23■□□□□ 0.51
TPM4-201ENST00000300933 TRBV24-1A0A075B6N3 115 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 SRRM5B3KS81 715 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 SPINK9Q5DT21 86 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 GFRALQ6UXV0 394 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 PRR7Q8TB68 274 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 TMEM242Q9NWH2 141 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 LAMP3Q9UQV4 416 aa18.23■□□□□ 0.51
TPM4-201ENST00000300933 YLPM1P49750 1951 aaKnown RBP18.22■□□□□ 0.51
TPM4-201ENST00000300933 PRRG2O14669 202 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 S1PR2O95136 353 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 OPN1MWP04001 364 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 OPN1MW2P0DN77 364 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 OPN1MW3P0DN78 364 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 BAXQ07812 192 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 ARL16Q0P5N6 197 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 CISD1Q9NZ45 108 aaKnown RBP18.22■□□□□ 0.51
TPM4-201ENST00000300933 LINC00473A8K010 186 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 IFNA5P01569 189 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 ZNF726P1Q15940 193 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 LBHQ53QV2 105 aaPredicted RBP18.22■□□□□ 0.51
TPM4-201ENST00000300933 FAM169BQ8N8A8 192 aa18.22■□□□□ 0.51
TPM4-201ENST00000300933 NCOR2Q9Y618 2525 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 SYNGR2O43760 224 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 CD40P25942 277 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 SNRNP40Q96DI7 357 aaKnown RBP18.21■□□□□ 0.51
TPM4-201ENST00000300933 TUBG2Q9NRH3 451 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 TDGF1P3P51864 188 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 SPANXN5Q5MJ07 72 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 ZNF66Q6ZN08 573 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 TACC2O95359 2948 aa18.21■□□□□ 0.51
TPM4-201ENST00000300933 IFNL4K9M1U5 179 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 NUTF2P61970 127 aaKnown RBP18.2■□□□□ 0.5
TPM4-201ENST00000300933 CCL8P80075 99 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 TBR1Q16650 682 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 C16orf82Q7Z2V1 217 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 OR10G4Q8NGN3 311 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 GNG12Q9UBI6 72 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 COL6A6A6NMZ7 2263 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 C15orf65H3BRN8 121 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 TGOLN2O43493 480 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 NOL4LQ96MY1 436 aaPredicted RBP18.2■□□□□ 0.5
TPM4-201ENST00000300933 WFIKKN1Q96NZ8 548 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 PSENENQ9NZ42 101 aa18.2■□□□□ 0.5
TPM4-201ENST00000300933 ODAMA1E959 279 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 CLDN1O95832 211 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 RBKSQ9H477 322 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 ABCA4P78363 2273 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 BTF3P20290 206 aaKnown RBP18.19■□□□□ 0.5
TPM4-201ENST00000300933 GZMHP20718 246 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 DPPA3Q6W0C5 159 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 TMEM37Q8WXS4 190 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 ACTR3CQ9C0K3 210 aaPredicted RBP18.19■□□□□ 0.5
TPM4-201ENST00000300933 SRD5A3Q9H8P0 318 aa18.19■□□□□ 0.5
TPM4-201ENST00000300933 A0A1B0GWJ7 208 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 OR4A8P0C604 315 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 ELLP55199 621 aaPredicted RBP18.18■□□□□ 0.5
TPM4-201ENST00000300933 SCGB1C1Q8TD33 95 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 RNASEH2CQ8TDP1 164 aaKnown RBP18.18■□□□□ 0.5
TPM4-201ENST00000300933 LSM10Q969L4 123 aaKnown RBP18.18■□□□□ 0.5
TPM4-201ENST00000300933 SMIM7Q9BQ49 75 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 GCM1Q9NP62 436 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 HMGB3O15347 200 aaKnown RBP18.18■□□□□ 0.5
TPM4-201ENST00000300933 SPINT2O43291 252 aa18.18■□□□□ 0.5
TPM4-201ENST00000300933 SOX15O60248 233 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms