RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RNASE11Q8TAA1 199 aaKnown RBP19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 CFHR4Q92496 578 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 FLYWCH2Q96CP2 140 aaKnown RBP19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 RNF126Q9BV68 326 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 CACNG5Q9UF02 275 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 ITPR3Q14573 2671 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 IGHV1-69DA0A0B4J2H0 117 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 HRASP01112 189 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 IGHV1-69P01742 117 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 MBPP02686 304 aaPredicted RBP19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 SAA4P35542 130 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 ARHGDIBP52566 201 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 ID3Q02535 119 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 SSX2Q16385 188 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 LRRC37A5PQ49AS3 106 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 THOC7Q6I9Y2 204 aaKnown RBP19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 H2BFWTQ7Z2G1 175 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 RHOVQ96L33 236 aa19.84■□□□□ 0.77
GTF2A1-201ENST00000298173 CREBBPQ92793 2442 aa19.83■□□□□ 0.77
GTF2A1-201ENST00000298173 ABCA1O95477 2261 aa19.83■□□□□ 0.77
GTF2A1-201ENST00000298173 IGHV3-72A0A0B4J1Y9 119 aa19.83■□□□□ 0.76
GTF2A1-201ENST00000298173 FAM90A9PA6NNJ1 464 aa19.83■□□□□ 0.76
GTF2A1-201ENST00000298173 H0YIZ8 118 aa19.83■□□□□ 0.76
GTF2A1-201ENST00000298173 EIF2B2P49770 351 aaKnown RBP19.83■□□□□ 0.76
GTF2A1-201ENST00000298173 TIMM23O14925 209 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 SLC25A4P12235 298 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 CD1BP29016 333 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 NKX2-5P52952 324 aaPredicted RBP19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 CXorf66Q5JRM2 361 aaPredicted RBP19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 CYB5R2Q6BCY4 276 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 CCDC144NLQ6NUI1 221 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 C11orf87Q6NUJ2 197 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 DMBX1Q8NFW5 382 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 RITA1Q96K30 269 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 AIFM2Q9BRQ8 373 aa19.82■□□□□ 0.76
GTF2A1-201ENST00000298173 SHOXO15266 292 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 OR9G9P0C7N8 305 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 LYL1P12980 280 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 ERVK-16P61578 105 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 KLF17Q5JT82 389 aaPredicted RBP19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 SSX9Q7RTT3 188 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 TMEM140Q9NV12 185 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 ZANQ9Y493 2812 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 TRAV40A0A0B4J280 105 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 IGLV2-23P01705 113 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 IGHV4-38-2P0DP08 117 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 PAX6P26367 422 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 AARDQ4LEZ3 155 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 GPR157Q5UAW9 335 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 OR4A47Q6IF82 309 aa19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 MS4A7Q9GZW8 240 aaPredicted RBP19.81■□□□□ 0.76
GTF2A1-201ENST00000298173 K7EPK0 472 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 NKX2-1P43699 371 aaPredicted RBP19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 LGALS7P47929 136 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 TMEM65Q6PI78 240 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 PUSL1Q8N0Z8 303 aaKnown RBP19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 FAM71E2Q8N5Q1 922 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 OR1S1Q8NH92 325 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 HARBI1Q96MB7 349 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 AKAP9Q99996 3911 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 ZFP57Q9NU63 452 aa19.8■□□□□ 0.76
GTF2A1-201ENST00000298173 HMSDA8MTL9 139 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 ST8SIA3O43173 380 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 VENTXO95231 258 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 RPS16P62249 146 aaKnown RBP19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 RELBQ01201 579 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 RUSC1-AS1Q66K80 236 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 PRSS54Q6PEW0 395 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 RNF5Q99942 180 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 POMT1Q9Y6A1 747 aa19.79■□□□□ 0.76
GTF2A1-201ENST00000298173 IGHV3OR16-10A0A075B7F0 116 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 TRAV3A0A0B4J244 114 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 THAP6Q8TBB0 222 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 BET1LQ9NYM9 111 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 OR5AC2Q9NZP5 309 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 MBD2Q9UBB5 411 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 DEDDO75618 318 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 SCGB1D2O95969 90 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 C11orf1Q9H5F2 150 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 RCL1Q9Y2P8 373 aaKnown RBP19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 NSG2Q9Y328 171 aa19.78■□□□□ 0.76
GTF2A1-201ENST00000298173 TNCP24821 2201 aa19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 FAM90A26D6RGX4 464 aa19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 SAA1P0DJI8 122 aaPredicted RBP19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 S100A10P60903 97 aa19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 EBI3Q14213 229 aa19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 LAMTOR1Q6IAA8 161 aa19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 BRD3OSQ6XYD6 125 aa19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 GRPEL2Q8TAA5 225 aa19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 LSM5Q9Y4Y9 91 aaKnown RBP19.77■□□□□ 0.76
GTF2A1-201ENST00000298173 CSPG4Q6UVK1 2322 aa19.77■□□□□ 0.75
GTF2A1-201ENST00000298173 UPK2O00526 184 aa19.76■□□□□ 0.75
GTF2A1-201ENST00000298173 PET100P0DJ07 73 aa19.76■□□□□ 0.75
GTF2A1-201ENST00000298173 POLR2GP62487 172 aaKnown RBP eCLIP19.76■□□□□ 0.75
GTF2A1-201ENST00000298173 FOXRED2Q8IWF2 684 aa19.76■□□□□ 0.75
GTF2A1-201ENST00000298173 HSPB7Q9UBY9 170 aa19.76■□□□□ 0.75
GTF2A1-201ENST00000298173 TET2Q6N021 2002 aaPredicted RBP19.76■□□□□ 0.75
GTF2A1-201ENST00000298173 CELSR1Q9NYQ6 3014 aa19.76■□□□□ 0.75
GTF2A1-201ENST00000298173 FXYD6-FXYD2A0A087WZ82 144 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms