RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 KLF17Q5JT82 389 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-201ENST00000293889 ZNF833PQ6ZTB9 187 aa14.41□□□□□ -0.1
CCDC78-201ENST00000293889 LHFPL4Q7Z7J7 247 aa14.41□□□□□ -0.1
CCDC78-201ENST00000293889 BAP18Q8IXM2 172 aa14.41□□□□□ -0.1
CCDC78-201ENST00000293889 CMTM1Q8IZ96 169 aa14.41□□□□□ -0.1
CCDC78-201ENST00000293889 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-201ENST00000293889 ZBTB34Q8NCN2 500 aa14.41□□□□□ -0.1
CCDC78-201ENST00000293889 DCUN1D4Q92564 292 aa14.41□□□□□ -0.1
CCDC78-201ENST00000293889 ANK3Q12955 4377 aaKnown RBP14.4□□□□□ -0.1
CCDC78-201ENST00000293889 IL3RAP26951 378 aa14.4□□□□□ -0.1
CCDC78-201ENST00000293889 EIF4EBP1Q13541 118 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-201ENST00000293889 C10orf91Q5T1B1 145 aa14.4□□□□□ -0.1
CCDC78-201ENST00000293889 RUSC1-AS1Q66K80 236 aa14.4□□□□□ -0.1
CCDC78-201ENST00000293889 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
CCDC78-201ENST00000293889 RRNAD1Q96FB5 475 aaKnown RBP14.4□□□□□ -0.1
CCDC78-201ENST00000293889 S1PR3Q99500 378 aa14.4□□□□□ -0.1
CCDC78-201ENST00000293889 C13orf42A0A1B0GVH6 325 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 M0R1X1 148 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 TAAR5O14804 337 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 NPFFO15130 113 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 PGLYRP1O75594 196 aaPredicted RBP14.39□□□□□ -0.11
CCDC78-201ENST00000293889 PET100P0DJ07 73 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 REG1BP48304 166 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 LGALS4P56470 323 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 LINC00205P59089 165 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 RND3P61587 244 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 MIDNQ504T8 468 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 GPR157Q5UAW9 335 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 BPIFCQ8NFQ6 507 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 RNF141Q8WVD5 230 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 DPM3Q9P2X0 92 aa14.39□□□□□ -0.11
CCDC78-201ENST00000293889 FN1P02751 2386 aaKnown RBP14.39□□□□□ -0.11
CCDC78-201ENST00000293889 DNASE2O00115 360 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-201ENST00000293889 FAM157CP0CG43 387 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 SAA4P35542 130 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 EIF5AP63241 154 aaKnown RBP14.38□□□□□ -0.11
CCDC78-201ENST00000293889 MINOS1Q5TGZ0 78 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 BRD3OSQ6XYD6 125 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 TBC1D26Q86UD7 250 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 CCDC71LQ8N9Z2 235 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-201ENST00000293889 AJUBAQ96IF1 538 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 MS4A7Q9GZW8 240 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-201ENST00000293889 MINOS1-NBL1R4GNA1 71 aa14.38□□□□□ -0.11
CCDC78-201ENST00000293889 MPPED1O15442 326 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 S100GP29377 79 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 SLC9A3R2Q15599 337 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 TPTE2P1Q5T6R2 138 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 FAM71F2Q6NXP2 309 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 FAM122CQ6P4D5 195 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 OR1S2Q8NGQ3 325 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 SAT2Q96F10 170 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-201ENST00000293889 TBL2Q9Y4P3 447 aaKnown RBP14.37□□□□□ -0.11
CCDC78-201ENST00000293889 HILPDAQ9Y5L2 63 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 TMEM218A2RU14 115 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 CRYM-AS1A6NIL9 109 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 LINC00473A8K010 186 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 INAFM1C9JVW0 142 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 ADAP1O75689 374 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 FSHBP01225 129 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 CT45A6P0DMU7 189 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 CT45A5P0DMU8 189 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 CT45A7P0DMV0 189 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 CTRB1P17538 263 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 DUTP33316 252 aaKnown RBP14.37□□□□□ -0.11
CCDC78-201ENST00000293889 CEACAM3P40198 252 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 RPL30P62888 115 aaKnown RBP14.37□□□□□ -0.11
CCDC78-201ENST00000293889 CTRB2Q6GPI1 263 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 IL34Q6ZMJ4 242 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.37□□□□□ -0.11
CCDC78-201ENST00000293889 OR51H1Q8NH63 302 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 RPEQ96AT9 228 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 OR10C1Q96KK4 312 aa14.37□□□□□ -0.11
CCDC78-201ENST00000293889 HSD17B10Q99714 261 aaKnown RBP14.37□□□□□ -0.11
CCDC78-201ENST00000293889 MRPL20Q9BYC9 149 aaKnown RBP14.37□□□□□ -0.11
CCDC78-201ENST00000293889 APOC3P02656 99 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 H2AFB1P0C5Y9 115 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 PAX6P26367 422 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 SSX2Q16385 188 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 ATRAIDQ6UW56 229 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 ZNF66Q6ZN08 573 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 TGIF2LXQ8IUE1 241 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 DYNAPQ8N1N2 210 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 NANPQ8TBE9 248 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 NAA60Q9H7X0 242 aa14.36□□□□□ -0.11
CCDC78-201ENST00000293889 TSPAN4O14817 238 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 ATG12O94817 140 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 IFNA2P01563 188 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 GAPDHP04406 335 aaKnown RBP14.35□□□□□ -0.11
CCDC78-201ENST00000293889 EPHA1P21709 976 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 F2RP25116 425 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 ZNF816Q0VGE8 651 aaPredicted RBP14.35□□□□□ -0.11
CCDC78-201ENST00000293889 SGPP2Q8IWX5 399 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 ZNF383Q8NA42 475 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 MALSU1Q96EH3 234 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 OR5AC2Q9NZP5 309 aa14.35□□□□□ -0.11
CCDC78-201ENST00000293889 CARHSP1Q9Y2V2 147 aaKnown RBP14.35□□□□□ -0.11
CCDC78-201ENST00000293889 SOX21Q9Y651 276 aaPredicted RBP14.35□□□□□ -0.11
CCDC78-201ENST00000293889 IGHV1-3A0A0C4DH29 117 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 C3orf85A0A1B0GTC6 90 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms