RNA–Protein interactions for RNA: ENST00000293725.9

ZNF563-201, Transcript of zinc finger protein 563, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF563, Length 2,754 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF563-201ENST00000293725 USF3Q68DE3 2245 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 LOC105371242A0A075B767 164 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 A0A0G2JMM0 328 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 A0A1W2PPB8 328 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 A0A1W2PRS3 328 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 C15orf62A8K5M9 175 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 KIR3DP1A8MWS1 328 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 DNPH1O43598 174 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 B3GALT5-AS1P59052 145 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 TMEM249Q2WGJ8 235 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 ALKBH2Q6NS38 261 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 C5orf30Q96GV9 206 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 R4GN57 208 aa12.94□□□□□ -0.34
ZNF563-201ENST00000293725 K7EP13 123 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 TSPOP30536 169 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 ZNF497Q6ZNH5 498 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 KLHDC1Q8N7A1 406 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 SFXN3Q9BWM7 321 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 GNB1LQ9BYB4 327 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 ANKRD30BLA7E2S9 258 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 GDF9O60383 454 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 MMP23AO75900 390 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 OR2H2O95918 312 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 CXorf1O96002 111 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 TOMM40O96008 361 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 STAG3L2P0CL84 134 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 STAG3L3P0CL85 134 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 NTF3P20783 257 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 COL8A2P25067 703 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 GNG3P63215 75 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 PDLIM3Q53GG5 364 aaPredicted RBP12.93□□□□□ -0.34
ZNF563-201ENST00000293725 MIC13Q5XKP0 118 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 TCTEX1D1Q8N7M0 179 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 TXNDC17Q9BRA2 123 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 BET1LQ9NYM9 111 aa12.93□□□□□ -0.34
ZNF563-201ENST00000293725 ZNF324O75467 553 aaPredicted RBP12.92□□□□□ -0.34
ZNF563-201ENST00000293725 RAC2P15153 192 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 GFRA1P56159 465 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 TRBV9A0A0B4J1U6 114 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 ZNF503-AS2A6NEH8 195 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 SRIP30626 198 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 PRRX1P54821 245 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 TCL1AP56279 114 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 LINC00205P59089 165 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 OR4C5Q8NGB2 326 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 EAF1Q96JC9 268 aaPredicted RBP12.92□□□□□ -0.34
ZNF563-201ENST00000293725 V9GYV3 84 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 IGHV3-64DA0A0J9YX35 117 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 FAM166BA8MTA8 275 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 NEURL1O76050 574 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 BRWD1-AS2P59051 145 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 CATR1Q13166 79 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 ZNF718Q3SXZ3 478 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 WIPI1Q5MNZ9 446 aaPredicted RBP12.92□□□□□ -0.34
ZNF563-201ENST00000293725 LCN12Q6JVE5 192 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 NIT1Q86X76 327 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 SLC35D1Q9NTN3 355 aa12.92□□□□□ -0.34
ZNF563-201ENST00000293725 EN2P19622 333 aaPredicted RBP12.91□□□□□ -0.34
ZNF563-201ENST00000293725 FOXG1P55316 489 aaPredicted RBP12.91□□□□□ -0.34
ZNF563-201ENST00000293725 FBLN7Q53RD9 439 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 OR10J3Q5JRS4 329 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 FREM1Q5H8C1 2179 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 RAB29O14966 203 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 CLDN14O95500 239 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 DCAF12Q5T6F0 453 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
ZNF563-201ENST00000293725 OR52L2PQ8NGH6 319 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
ZNF563-201ENST00000293725 GTF3C1Q12789 2109 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
ZNF563-201ENST00000293725 SAA2-SAA4A0A096LPE2 208 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 MRPL33O75394 65 aaKnown RBP12.9□□□□□ -0.34
ZNF563-201ENST00000293725 CA2P00918 260 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 RFPL3SP0C7P2 107 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 FXYD3Q14802 87 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 TREML4Q6UXN2 200 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 TMEM136Q6ZRR5 245 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 SSMEM1Q8WWF3 244 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 IGHV1-45A0A0A0MS14 117 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 OR5B21A6NL26 309 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 GCHFRP30047 84 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 SRD5A2P31213 254 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 OPRK1P41145 380 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 STUMQ69YW2 141 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 MRPL14Q6P1L8 145 aaKnown RBP12.9□□□□□ -0.34
ZNF563-201ENST00000293725 ERASQ7Z444 233 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 KCNE4Q8WWG9 221 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 MGST2Q99735 147 aa12.9□□□□□ -0.34
ZNF563-201ENST00000293725 MT-ND6P03923 174 aa12.89□□□□□ -0.35
ZNF563-201ENST00000293725 SSPNQ14714 243 aa12.89□□□□□ -0.35
ZNF563-201ENST00000293725 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
ZNF563-201ENST00000293725 SPATA31B1PQ5VZV4 182 aa12.89□□□□□ -0.35
ZNF563-201ENST00000293725 MRPL54Q6P161 138 aaKnown RBP12.89□□□□□ -0.35
ZNF563-201ENST00000293725 WDR73Q6P4I2 378 aa12.89□□□□□ -0.35
ZNF563-201ENST00000293725 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
ZNF563-201ENST00000293725 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
ZNF563-201ENST00000293725 RNASE7Q9H1E1 156 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms