RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 IZUMO4Q1ZYL8 232 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 SMIM20Q8N5G0 67 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 OR2T6Q8NHC8 308 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 CLCF1Q9UBD9 225 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 SPACA6W5XKT8 324 aa7.76□□□□□ -1.17
PDGFC-201ENST00000274071 MUC22E2RYF6 1773 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-201ENST00000274071 EPOPA6NHQ4 379 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 LINC01565O15544 149 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 PPYP01298 95 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 APOA2P02652 100 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 REG1BP48304 166 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 CX3CL1P78423 397 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 ZNF418Q8TF45 676 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-201ENST00000274071 TXNIPQ9H3M7 391 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 PSENENQ9NZ42 101 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 KCNIP1Q9NZI2 227 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 IGKV1D-43A0A0B4J1Z2 117 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 ISLRO14498 428 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 RPL32P62910 135 aaKnown RBP7.75□□□□□ -1.17
PDGFC-201ENST00000274071 RNPS1Q15287 305 aaKnown RBP7.75□□□□□ -1.17
PDGFC-201ENST00000274071 RD3Q7Z3Z2 195 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 ZDHHC23Q8IYP9 409 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 OR5D13Q8NGL4 314 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 LMX1AQ8TE12 382 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 LSM10Q969L4 123 aaKnown RBP7.75□□□□□ -1.17
PDGFC-201ENST00000274071 RAB37Q96AX2 223 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 GALMQ96C23 342 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 DUSP23Q9BVJ7 150 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 CHRNA10Q9GZZ6 450 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 MS4A5Q9H3V2 200 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 KCNIP2Q9NS61 270 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 ERG28Q9UKR5 140 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 TIMM9Q9Y5J7 89 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 CACNA1IQ9P0X4 2223 aa7.75□□□□□ -1.17
PDGFC-201ENST00000274071 VWC2LB2RUY7 222 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 J3QR89 54 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 FAM87AP0C7U9 286 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 ID1P41134 155 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 GAGE5Q13069 117 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 GAGE6Q13070 117 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 KIR3DS1Q14943 382 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 SLC35E4Q6ICL7 350 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 ADAMTSL5Q6ZMM2 481 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 RLN3Q8WXF3 142 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 SPAG8Q99932 426 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-201ENST00000274071 V9GYV3 84 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 MYO7BQ6PIF6 2116 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 A6NDN8 102 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 LIPT2A6NK58 231 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 B5MCH6 92 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 CMPK1P30085 196 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 DRD3P35462 400 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 PARM1Q6UWI2 310 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 ZNF818PQ6ZRF7 136 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 Q6ZRM9 215 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 DOK3Q7L591 496 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 FA2HQ7L5A8 372 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 RAB42Q8N4Z0 105 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 RDH5Q92781 318 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 DPF1Q92782 380 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 Q96M66 194 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 TECRQ9NZ01 308 aaKnown RBP7.74□□□□□ -1.17
PDGFC-201ENST00000274071 H0Y8G0 127 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 HRKO00198 91 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 SYNGR2O43760 224 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 ACP7Q6ZNF0 438 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 DOLPP1Q86YN1 238 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 TPRX1Q8N7U7 411 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 OR8B12Q8NGG6 310 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 FGF14Q92915 247 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 CLDN23Q96B33 292 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 CITED1Q99966 193 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 RPP25Q9BUL9 199 aaKnown RBP7.74□□□□□ -1.17
PDGFC-201ENST00000274071 METTL7AQ9H8H3 244 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-201ENST00000274071 TRAPPC2LQ9UL33 140 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
PDGFC-201ENST00000274071 SYS1-DBNDD2H3BUS1 97 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 B3GALT2O43825 422 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 IGHG1P01857 330 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 APCSP02743 223 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 HLA-DOBP13765 273 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 CD38P28907 300 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 CST6Q15828 149 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 SPANXN5Q5MJ07 72 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 ADAMTSL4Q6UY14 1074 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 SHISA6Q6ZSJ9 500 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 GAPTQ8N292 157 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 OR10G6Q8NH81 332 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 FAM131CQ96AQ9 280 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 COX14Q96I36 57 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 GPR82Q96P67 336 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 TNFRSF19Q9NS68 423 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 HILPDAQ9Y5L2 63 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 F5P12259 2224 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 TMEM265A0A087WTH1 108 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 SCO2A0A1W2PP80 73 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 NEURL1O76050 574 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 WISP1O95388 367 aa7.73□□□□□ -1.17
PDGFC-201ENST00000274071 HLA-DQA1P01909 254 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 598.7 ms