RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 NCR3LG1Q68D85 454 aa19.96■□□□□ 0.79
SSBP4-201ENST00000270061 C8orf46Q8TAG6 207 aa19.96■□□□□ 0.79
SSBP4-201ENST00000270061 JMJD8Q96S16 334 aa19.96■□□□□ 0.79
SSBP4-201ENST00000270061 ZNF251Q9BRH9 671 aa19.96■□□□□ 0.79
SSBP4-201ENST00000270061 MMP24Q9Y5R2 645 aa19.96■□□□□ 0.79
SSBP4-201ENST00000270061 M0R1X1 148 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 RBFOX2O43251 390 aaKnown RBP eCLIP19.95■□□□□ 0.784e-7■■■■□ 22.9
SSBP4-201ENST00000270061 KCNAB3O43448 404 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 CFDP00746 253 aaPredicted RBP19.95■□□□□ 0.78
SSBP4-201ENST00000270061 HKR1P10072 659 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 AKR1C2P52895 323 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 RPL39P5Q59GN2 51 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 RNASE11Q8TAA1 199 aaKnown RBP19.95■□□□□ 0.78
SSBP4-201ENST00000270061 ZNF596Q8TC21 504 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 ARPC5LQ9BPX5 153 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 C11orf1Q9H5F2 150 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 A0A087X0M5 115 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 A0A1B0GX30 115 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 MSGN1A6NI15 193 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 P0C879 139 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 KIR2DS2P43631 304 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 DMBX1Q8NFW5 382 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 COA4Q9NYJ1 87 aa19.95■□□□□ 0.78
SSBP4-201ENST00000270061 RCL1Q9Y2P8 373 aaKnown RBP19.95■□□□□ 0.78
SSBP4-201ENST00000270061 SAA2-SAA4A0A096LPE2 208 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 A0A1W2PPE3 182 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 LIPFP07098 398 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 SAA2P0DJI9 122 aaPredicted RBP19.94■□□□□ 0.78
SSBP4-201ENST00000270061 MMP9P14780 707 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 P2RY1P47900 373 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 EXOSC2Q13868 293 aaKnown RBP19.94■□□□□ 0.78
SSBP4-201ENST00000270061 CXorf66Q5JRM2 361 aaPredicted RBP19.94■□□□□ 0.78
SSBP4-201ENST00000270061 Q6ZRM9 215 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 LINC00311Q8N616 119 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 DDB2Q92466 427 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 ADTRPQ96IZ2 230 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 PRELID3BQ9Y3B1 194 aa19.94■□□□□ 0.78
SSBP4-201ENST00000270061 A0A1W2PPH5 198 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 S1PR2O95136 353 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 RPL12P30050 165 aaKnown RBP19.93■□□□□ 0.78
SSBP4-201ENST00000270061 UBA52P62987 128 aaKnown RBP19.93■□□□□ 0.78
SSBP4-201ENST00000270061 ZNF816Q0VGE8 651 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-201ENST00000270061 LYG1Q8N1E2 194 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 C11orf42Q8N5U0 333 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 RBP4P02753 201 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 IGHV4-38-2P0DP08 117 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 THBS3P49746 956 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 GNG10P50151 68 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 LINC00205P59089 165 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 ERVFRD-1P60508 538 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 OR2B11Q5JQS5 317 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 GPR157Q5UAW9 335 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 MS4A7Q9GZW8 240 aaPredicted RBP19.93■□□□□ 0.78
SSBP4-201ENST00000270061 CACNG5Q9UF02 275 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 UBQLN2Q9UHD9 624 aa19.93■□□□□ 0.78
SSBP4-201ENST00000270061 TRAV40A0A0B4J280 105 aa19.92■□□□□ 0.78
SSBP4-201ENST00000270061 HPRT1P00492 218 aa19.92■□□□□ 0.78
SSBP4-201ENST00000270061 RBMS3Q6XE24 437 aaKnown RBP19.92■□□□□ 0.78
SSBP4-201ENST00000270061 S1PR3Q99500 378 aa19.92■□□□□ 0.78
SSBP4-201ENST00000270061 ANK2Q01484 3957 aa19.91■□□□□ 0.78
SSBP4-201ENST00000270061 TRIM77I1YAP6 450 aa19.91■□□□□ 0.78
SSBP4-201ENST00000270061 IGHV1-8P0DP01 117 aa19.91■□□□□ 0.78
SSBP4-201ENST00000270061 PVALBP20472 110 aaPredicted RBP19.91■□□□□ 0.78
SSBP4-201ENST00000270061 POLR2GP62487 172 aaKnown RBP eCLIP19.91■□□□□ 0.78
SSBP4-201ENST00000270061 LY6G5BQ8NDX9 201 aa19.91■□□□□ 0.78
SSBP4-201ENST00000270061 IGHV3OR16-10A0A075B7F0 116 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 TAAR5O14804 337 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 BCL6BQ8N143 479 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-201ENST00000270061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-201ENST00000270061 PCGF1Q9BSM1 259 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 SESN1Q9Y6P5 492 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 FAM90A26D6RGX4 464 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 GPR137BO60478 399 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 FCGR3BO75015 233 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 KRASP01116 189 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 G6PCP35575 357 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 ZNF833PQ6ZTB9 187 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 SIGLECL1Q8N7X8 197 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 ST8SIA2Q92186 375 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 ZNF471Q9BX82 626 aaPredicted RBP19.9■□□□□ 0.78
SSBP4-201ENST00000270061 CYTL1Q9NRR1 136 aa19.9■□□□□ 0.78
SSBP4-201ENST00000270061 ARHGDIBP52566 201 aa19.89■□□□□ 0.77
SSBP4-201ENST00000270061 IZUMO4Q1ZYL8 232 aa19.89■□□□□ 0.77
SSBP4-201ENST00000270061 TUSC1Q2TAM9 212 aa19.89■□□□□ 0.77
SSBP4-201ENST00000270061 FAM71F2Q6NXP2 309 aa19.89■□□□□ 0.77
SSBP4-201ENST00000270061 STOML3Q8TAV4 291 aa19.89■□□□□ 0.77
SSBP4-201ENST00000270061 ESM1Q9NQ30 184 aa19.89■□□□□ 0.77
SSBP4-201ENST00000270061 J3QR06 171 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 TOX4O94842 621 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 HTR2BP41595 481 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 MIDNQ504T8 468 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 OR9G1Q8NH87 305 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 TENM1Q9UKZ4 2725 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 FAM90A9PA6NNJ1 464 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 TOR1AO14656 332 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 C9orf139Q6ZV77 190 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 ZNF383Q8NA42 475 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 OR4S2Q8NH73 311 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 SCARB1Q8WTV0 552 aa19.88■□□□□ 0.77
SSBP4-201ENST00000270061 PHYHIPLQ96FC7 376 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms