RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 RTL8BQ17RB0 113 aa13.09□□□□□ -0.31
PCTP-201ENST00000268896 SPINK9Q5DT21 86 aa13.09□□□□□ -0.31
PCTP-201ENST00000268896 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 ANKRD34BA5PLL1 514 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 E5RGE8 158 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 RBFOX2O43251 390 aaKnown RBP eCLIP13.08□□□□□ -0.31
PCTP-201ENST00000268896 CHST1O43916 411 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 FOXH1O75593 365 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 APOA2P02652 100 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 P0C879 139 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 HKR1P10072 659 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 NQO2P16083 231 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 PRTN3P24158 256 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 MIDNQ504T8 468 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 HCP5Q6MZN7 132 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 TNFRSF14Q92956 283 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 TMEM140Q9NV12 185 aa13.08□□□□□ -0.31
PCTP-201ENST00000268896 MAP1AP78559 2803 aaPredicted RBP13.08□□□□□ -0.32
PCTP-201ENST00000268896 LEUTXA8MZ59 168 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 H3BP45 60 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 NMBP08949 121 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 SLC25A6P12236 298 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
PCTP-201ENST00000268896 VAMP2P63027 116 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 LDLRAD2Q5SZI1 272 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 LHFPL4Q7Z7J7 247 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 BEND2Q8NDZ0 799 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 CYTL1Q9NRR1 136 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 ABCA2Q9BZC7 2435 aa13.08□□□□□ -0.32
PCTP-201ENST00000268896 FAM24AA6NFZ4 105 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 SRRM4A7MD48 611 aaKnown RBP13.07□□□□□ -0.32
PCTP-201ENST00000268896 TOX4O94842 621 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 PAX1P15863 534 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 HOXB4P17483 251 aaPredicted RBP13.07□□□□□ -0.32
PCTP-201ENST00000268896 CAV2P51636 162 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 ZNF137PP52743 207 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 DVL1P1P54792 670 aaPredicted RBP13.07□□□□□ -0.32
PCTP-201ENST00000268896 MOB3BQ86TA1 216 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 RPEQ96AT9 228 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 QTRT1Q9BXR0 403 aaKnown RBP13.07□□□□□ -0.32
PCTP-201ENST00000268896 SMIM3Q9BZL3 60 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 AUP1Q9Y679 476 aa13.07□□□□□ -0.32
PCTP-201ENST00000268896 RNASEK-C17orf49H0YIS7 233 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 SHOXO15266 292 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 TMEM50AO95807 157 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 FAM71F2Q6NXP2 309 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 KIR3DL3Q8N743 410 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 OR5AN1Q8NGI8 311 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 STOML3Q8TAV4 291 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 PHYHIPLQ96FC7 376 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 BSCL2Q96G97 398 aaPredicted RBP13.06□□□□□ -0.32
PCTP-201ENST00000268896 RHOVQ96L33 236 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 SIRPDQ9H106 197 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
PCTP-201ENST00000268896 DEFB113Q30KQ7 82 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 MAPK1IP1LQ8NDC0 245 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 OR4A16Q8NH70 328 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 LHX4Q969G2 390 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 HARBI1Q96MB7 349 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.06□□□□□ -0.32
PCTP-201ENST00000268896 AMMECR1Q9Y4X0 333 aaPredicted RBP13.06□□□□□ -0.32
PCTP-201ENST00000268896 INSIG2Q9Y5U4 225 aa13.06□□□□□ -0.32
PCTP-201ENST00000268896 TPT1P13693 172 aaKnown RBP13.05□□□□□ -0.32
PCTP-201ENST00000268896 DSCR9P59020 149 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 RPS16P62249 146 aaKnown RBP13.05□□□□□ -0.32
PCTP-201ENST00000268896 FAM74A1Q5RGS3 127 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 OR4A47Q6IF82 309 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 OR11H6Q8NGC7 330 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 RITA1Q96K30 269 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 TBX15Q96SF7 602 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 RBKSQ9H477 322 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 C11orf1Q9H5F2 150 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 IGHV1-3A0A0C4DH29 117 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 TAAR5O14804 337 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 SYNGR2O43760 224 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 GAPDHP04406 335 aaKnown RBP13.05□□□□□ -0.32
PCTP-201ENST00000268896 RRASP10301 218 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 MMP9P14780 707 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 MYOD1P15172 320 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 HTR1DP28221 377 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 P2RY1P47900 373 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 C1orf122Q6ZSJ8 110 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 COMMD7Q86VX2 200 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 FLYWCH2Q96CP2 140 aaKnown RBP13.05□□□□□ -0.32
PCTP-201ENST00000268896 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 COA4Q9NYJ1 87 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 WASHC3Q9Y3C0 194 aa13.05□□□□□ -0.32
PCTP-201ENST00000268896 IGSF23A1L1A6 192 aa13.04□□□□□ -0.32
PCTP-201ENST00000268896 HRASP01112 189 aa13.04□□□□□ -0.32
PCTP-201ENST00000268896 USF1P22415 310 aaPredicted RBP13.04□□□□□ -0.32
PCTP-201ENST00000268896 PAX9P55771 341 aa13.04□□□□□ -0.32
PCTP-201ENST00000268896 UBE2KP61086 200 aa13.04□□□□□ -0.32
PCTP-201ENST00000268896 RELBQ01201 579 aa13.04□□□□□ -0.32
PCTP-201ENST00000268896 NHLH2Q02577 135 aa13.04□□□□□ -0.32
PCTP-201ENST00000268896 TNFRSF9Q07011 255 aa13.04□□□□□ -0.32
PCTP-201ENST00000268896 OR2C3Q8N628 320 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms