RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ST6GALNAC5Q9BVH7 336 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 TXNL4BQ9NX01 149 aaKnown RBP7.46□□□□□ -1.22
VPS41-201ENST00000265745 RBM7Q9Y580 266 aaKnown RBP7.46□□□□□ -1.22
VPS41-201ENST00000265745 C13orf42A0A1B0GVH6 325 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 SMIM30A4D0T7 59 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 MSGN1A6NI15 193 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 LINC00473A8K010 186 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 CTXN2P0C2S0 81 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 ZP3P21754 424 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 UBE2KP61086 200 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 PITPNAQ00169 270 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 CBX3Q13185 183 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 KLF5Q13887 457 aaPredicted RBP7.45□□□□□ -1.22
VPS41-201ENST00000265745 TPRA1Q86W33 373 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 ELOVL1Q9BW60 279 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 YTHDF1Q9BYJ9 559 aaKnown RBP7.45□□□□□ -1.22
VPS41-201ENST00000265745 TINAGL1Q9GZM7 467 aaPredicted RBP7.45□□□□□ -1.22
VPS41-201ENST00000265745 DCSTAMPQ9H295 470 aa7.45□□□□□ -1.22
VPS41-201ENST00000265745 TRIM64CA6NLI5 447 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 J3QRK9 145 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 RBMXL2O75526 392 aaKnown RBP7.44□□□□□ -1.22
VPS41-201ENST00000265745 ATP6V1G2O95670 118 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 CRYZL1O95825 349 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 IGLV2-14P01704 120 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 HLA-DQB1P01920 261 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 FRMD6-AS1P0C7T7 363 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 AADACP22760 399 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 NFYAP23511 347 aaPredicted RBP7.44□□□□□ -1.22
VPS41-201ENST00000265745 PSMB9P28065 219 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 DYRK1AQ13627 763 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 VMA21Q3ZAQ7 101 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 ZNF343Q6P1L6 599 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 IL34Q6ZMJ4 242 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 IDO2Q6ZQW0 420 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 OVCH2Q7RTZ1 564 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 ADAD2Q8NCV1 583 aaKnown RBP7.44□□□□□ -1.22
VPS41-201ENST00000265745 SVIPQ8NHG7 77 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 OSR1Q8TAX0 266 aaPredicted RBP7.44□□□□□ -1.22
VPS41-201ENST00000265745 FCGR1BQ92637 280 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 USMG5Q96IX5 58 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 DAPK2Q9UIK4 370 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 STUB1Q9UNE7 303 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 OR2W1Q9Y3N9 320 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 SORL1Q92673 2214 aa7.44□□□□□ -1.22
VPS41-201ENST00000265745 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 TMEM235A6NFC5 223 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 SSX5O60225 188 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 SCGNO76038 276 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 APELAP0DMC3 54 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 SDC2P34741 201 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 SFXN4Q6P4A7 337 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 CNIH2Q6PI25 160 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 HAPLN4Q86UW8 402 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 ANKRD13BQ86YJ7 626 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 ZNF645Q8N7E2 425 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 OR9G4Q8NGQ1 327 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 NUDCD2Q8WVJ2 157 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
VPS41-201ENST00000265745 PHB2Q99623 299 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 OR51E2Q9H255 320 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 ZNF430Q9H8G1 570 aaPredicted RBP7.43□□□□□ -1.22
VPS41-201ENST00000265745 COA4Q9NYJ1 87 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 PEF1Q9UBV8 284 aaKnown RBP7.43□□□□□ -1.22
VPS41-201ENST00000265745 SSR3Q9UNL2 185 aa7.43□□□□□ -1.22
VPS41-201ENST00000265745 RRP15Q9Y3B9 282 aaKnown RBP7.43□□□□□ -1.22
VPS41-201ENST00000265745 TRBV9A0A0B4J1U6 114 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 C3orf84H3BNL1 204 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 FCGR3BO75015 233 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 TUSC2O75896 110 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 SLC22A5O76082 557 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 TRBV12-3P01733 135 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 OR9G9P0C7N8 305 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 SAA1P0DJI8 122 aaPredicted RBP7.42□□□□□ -1.22
VPS41-201ENST00000265745 SYNJ2BPP57105 145 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 BRWD1-AS2P59051 145 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 GNG2P59768 71 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 RPL30P62888 115 aaKnown RBP7.42□□□□□ -1.22
VPS41-201ENST00000265745 DEFA5Q01523 94 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 TNXAQ16473 311 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 LGALS14Q8TCE9 139 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 C16orf92Q96LL3 132 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 RCHY1Q96PM5 261 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 DCUN1D5Q9BTE7 237 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 Q9H521 79 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 ANXA10Q9UJ72 324 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 RBMX2Q9Y388 322 aaKnown RBP7.42□□□□□ -1.22
VPS41-201ENST00000265745 PRELID3BQ9Y3B1 194 aa7.42□□□□□ -1.22
VPS41-201ENST00000265745 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
VPS41-201ENST00000265745 A8MZ25 164 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 MPPED1O15442 326 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 ACTL6BO94805 426 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 PRH1P02810 166 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 CSN3P07498 182 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 CLEC2LP0C7M8 214 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 IGHV4-30-4P0DP06 118 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 CD36P16671 472 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 RHOGP84095 191 aa7.41□□□□□ -1.22
VPS41-201ENST00000265745 ZNF45Q02386 682 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms