RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 ST6GALNAC6Q969X2 333 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 MARC2Q969Z3 335 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 TMEM186Q96B77 213 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 ARHGAP32A7KAX9 2087 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 DFFBO76075 338 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 RNF224P0DH78 156 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 PRB3Q04118 309 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-201ENST00000263559 CIB3Q96Q77 187 aaPredicted RBP12.87□□□□□ -0.35
VPS26A-201ENST00000263559 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
VPS26A-201ENST00000263559 PATZ1Q9HBE1 687 aaKnown RBP12.87□□□□□ -0.35
VPS26A-201ENST00000263559 HRASP01112 189 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 HBG1P69891 147 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 HBG2P69892 147 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 RUNX1Q01196 453 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 OR8G2PQ6IF36 304 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 Q6ZRG5 221 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 STPG2Q8N412 459 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 ZNF525Q8N782 197 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 CACFD1Q9UGQ2 172 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 A0A1W2PPH5 198 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 SRRM4A7MD48 611 aaKnown RBP12.86□□□□□ -0.35
VPS26A-201ENST00000263559 C22orf46C9J442 243 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 H0YJW9 148 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 C1QL1O75973 258 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 SPCS3P61009 180 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 GNB2P62879 340 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 POU2AF1Q16633 256 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 TMEM182Q6ZP80 229 aaPredicted RBP12.86□□□□□ -0.35
VPS26A-201ENST00000263559 LY6G5BQ8NDX9 201 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 OR2G3Q8NGZ4 309 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 OR52E5Q8NH55 327 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 LINC00052Q96N35 136 aa12.86□□□□□ -0.35
VPS26A-201ENST00000263559 STRAPQ9Y3F4 350 aaKnown RBP12.86□□□□□ -0.35
VPS26A-201ENST00000263559 FHITP49789 147 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 TAGLNQ01995 201 aaKnown RBP12.85□□□□□ -0.35
VPS26A-201ENST00000263559 DHRS7BQ6IAN0 325 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-201ENST00000263559 ZNF429Q86V71 674 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 PARP11Q9NR21 331 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 NUP50Q9UKX7 468 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 ZFYVE26Q68DK2 2539 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 IGHV2-26A0A0B4J1V2 119 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 C15orf61A6NNL5 157 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 H7C2Y5 167 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 IFNA5P01569 189 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 ZNF137PP52743 207 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 RPS16P62249 146 aaKnown RBP12.85□□□□□ -0.35
VPS26A-201ENST00000263559 FAM71F2Q6NXP2 309 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 LILRB2Q8N423 598 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 NABP2Q9BQ15 211 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 PMS2P5A8MQ11 134 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 APOA2P02652 100 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-201ENST00000263559 GPR6P46095 362 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-201ENST00000263559 EFNA4P52798 201 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 SLC38A11Q08AI6 406 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 PDLIM3Q53GG5 364 aaPredicted RBP12.85□□□□□ -0.35
VPS26A-201ENST00000263559 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
VPS26A-201ENST00000263559 MMP26Q9NRE1 261 aa12.85□□□□□ -0.35
VPS26A-201ENST00000263559 FLNCQ14315 2725 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 SPTAN1Q13813 2472 aaKnown RBP12.84□□□□□ -0.35
VPS26A-201ENST00000263559 LIPFP07098 398 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 SLC25A24Q6NUK1 477 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 GNPNAT1Q96EK6 184 aaPredicted RBP12.84□□□□□ -0.35
VPS26A-201ENST00000263559 ONECUT1Q9UBC0 465 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 SHOXO15266 292 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 IGLV1-47P01700 117 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 RBP4P02753 201 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 PRH1P02810 166 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 THNSL2Q86YJ6 484 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 TGIF2LXQ8IUE1 241 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 SSBP3Q9BWW4 388 aaPredicted RBP12.84□□□□□ -0.35
VPS26A-201ENST00000263559 TMEM14BQ9NUH8 114 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 TCF19Q9Y242 345 aa12.84□□□□□ -0.35
VPS26A-201ENST00000263559 AKAP6Q13023 2319 aa12.83□□□□□ -0.35
VPS26A-201ENST00000263559 VDAC2P45880 294 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-201ENST00000263559 CAMLGP49069 296 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 RAB5CP51148 216 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 ZNF843Q8N446 348 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 OSR1Q8TAX0 266 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-201ENST00000263559 TNFRSF14Q92956 283 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 FOXA2Q9Y261 457 aaPredicted RBP12.83□□□□□ -0.36
VPS26A-201ENST00000263559 MYOD1P15172 320 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 ZP3P21754 424 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 PRRX1P54821 245 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 HLA-DRB5Q30154 266 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 LYPD6BQ8NI32 183 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 LHX4Q969G2 390 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 CLEC7AQ9BXN2 247 aa12.83□□□□□ -0.36
VPS26A-201ENST00000263559 C15orf62A8K5M9 175 aa12.82□□□□□ -0.36
VPS26A-201ENST00000263559 OVOL3O00110 214 aa12.82□□□□□ -0.36
VPS26A-201ENST00000263559 UPK2O00526 184 aa12.82□□□□□ -0.36
VPS26A-201ENST00000263559 SAA1P0DJI8 122 aaPredicted RBP12.82□□□□□ -0.36
VPS26A-201ENST00000263559 COX7A1P24310 79 aa12.82□□□□□ -0.36
VPS26A-201ENST00000263559 IL3RAP26951 378 aa12.82□□□□□ -0.36
VPS26A-201ENST00000263559 F2RL1P55085 397 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms