RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PTPRZ1P23471 2315 aaPredicted RBP7.61□□□□□ -1.19
MSH4-201ENST00000263187 TRBV24-1A0A075B6N3 115 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 TSTD3H0UI37 97 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 M0R1X1 148 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 ACTL6BO94805 426 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 CATR1Q13166 79 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 PRAMEF5Q5TYX0 476 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 MOB1BQ7L9L4 216 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 LURAP1LQ8IV03 231 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 C11orf53Q8IXP5 236 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 R3HDM4Q96D70 268 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 IMMP2LQ96T52 175 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 ATG101Q9BSB4 218 aa7.61□□□□□ -1.19
MSH4-201ENST00000263187 HCFC1P51610 2035 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 ELOA3CA0A087WX78 387 aaPredicted RBP7.6□□□□□ -1.19
MSH4-201ENST00000263187 RNF212BA8MTL3 300 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 OR4A8P0C604 315 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 HOXC12P31275 282 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 GNB1P62873 340 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 HES3Q5TGS1 186 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 TMEM256Q8N2U0 113 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 ZNF664Q8N3J9 261 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 OR2T10Q8NGZ9 312 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 LRRC29Q8WV35 223 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 P2RX4Q99571 388 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 SPRY4Q9C004 299 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 YLPM1P49750 1951 aaKnown RBP7.6□□□□□ -1.19
MSH4-201ENST00000263187 AKAP13Q12802 2813 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 PMS2P5A8MQ11 134 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 NUPR1O60356 82 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 SCGB1D1O95968 90 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 GPR12P47775 334 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 SPATA31B1PQ5VZV4 182 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 WDR82Q6UXN9 313 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 TMEM183AQ8IXX5 376 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 MISP3Q96FF7 219 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 NEIL1Q96FI4 390 aaPredicted RBP7.6□□□□□ -1.19
MSH4-201ENST00000263187 LRFN3Q9BTN0 628 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 SRD5A3Q9H8P0 318 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 ZNRD1Q9P1U0 126 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 WIPI2Q9Y4P8 454 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 OOEPA6NGQ2 149 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 PROP1O75360 226 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 FRMD6-AS1P0C7T7 363 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 SP9P0CG40 484 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 ARL14EPLP0DKL9 152 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 CD82P27701 267 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 CD1BP29016 333 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 PRR31Q5SQ13 230 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 ACP7Q6ZNF0 438 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 CD177Q8N6Q3 437 aa7.6□□□□□ -1.19
MSH4-201ENST00000263187 C15orf62A8K5M9 175 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 SLC17A3O00476 420 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 HRASP01112 189 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 SLC35B1P78383 322 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 PEAR1Q5VY43 1037 aaPredicted RBP7.59□□□□□ -1.19
MSH4-201ENST00000263187 DUX4L9Q6RFH8 374 aaPredicted RBP7.59□□□□□ -1.19
MSH4-201ENST00000263187 Q8IYB0 196 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 MDS2Q8NDY4 140 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 OR4A16Q8NH70 328 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 OPN3Q9H1Y3 402 aaPredicted RBP7.59□□□□□ -1.19
MSH4-201ENST00000263187 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 NPIPB11E5RHQ5 1161 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 DVL1O14640 695 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 SLC31A2O15432 143 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 RBFOX2O43251 390 aaKnown RBP eCLIP7.59□□□□□ -1.19
MSH4-201ENST00000263187 GATCO43716 136 aaKnown RBP7.59□□□□□ -1.19
MSH4-201ENST00000263187 FOXH1O75593 365 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 ZNF134P52741 427 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 PDLIM3Q53GG5 364 aaPredicted RBP7.59□□□□□ -1.19
MSH4-201ENST00000263187 C1orf229Q6ZS94 237 aaPredicted RBP7.59□□□□□ -1.19
MSH4-201ENST00000263187 CTDSP1Q9GZU7 261 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 TMEM242Q9NWH2 141 aa7.59□□□□□ -1.19
MSH4-201ENST00000263187 CLDN14O95500 239 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 CECR9P0C854 216 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 GATA2P23769 480 aaPredicted RBP7.58□□□□□ -1.2
MSH4-201ENST00000263187 IL3RAP26951 378 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 PKIAP61925 76 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 TCF15Q12870 199 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 GABRA6Q16445 453 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 MOB3BQ86TA1 216 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 SGMS2Q8NHU3 365 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 Q8TCH9 128 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 MS4A5Q9H3V2 200 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 TRAPPC1Q9Y5R8 145 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 TRBV20OR9-2A0A075B6H5 130 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 PLXNB1O43157 2135 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 SPRY3O43610 288 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 GCH1P30793 250 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 ZNF83P51522 516 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 C9orf106Q8NAJ2 232 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 PRSS33Q8NF86 280 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 DDA1Q9BW61 102 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 OR6C3Q9NZP0 311 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 ACACAQ13085 2346 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 ANKRD11Q6UB99 2663 aaPredicted RBP7.58□□□□□ -1.2
MSH4-201ENST00000263187 CD59P13987 128 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 PRDX2P32119 198 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 GNG10P50151 68 aa7.58□□□□□ -1.2
MSH4-201ENST00000263187 LINC01551Q86U37 167 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms