RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HTR1DP28221 377 aa18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 MC5RP33032 325 aa18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 OSR1Q8TAX0 266 aaPredicted RBP18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 MBD6Q96DN6 1003 aa18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 HSPB7Q9UBY9 170 aa18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 WASHC3Q9Y3C0 194 aa18.52■□□□□ 0.56
SMARCB1-201ENST00000263121 A0A096LNT2 108 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 IGHV1-3A0A0C4DH29 117 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 H7C2Y5 167 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 WRBO00258 174 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 CHST1O43916 411 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 RPL12P30050 165 aaKnown RBP18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 RAB13P51153 203 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 TPTE2P1Q5T6R2 138 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 LHX4Q969G2 390 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 RPEQ96AT9 228 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 DPM3Q9P2X0 92 aa18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 ASH1LQ9NR48 2969 aaKnown RBP18.51■□□□□ 0.55
SMARCB1-201ENST00000263121 LEUTXA8MZ59 168 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 BCL2L11O43521 198 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 SYNGR2O43760 224 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 TMEM50AO95807 157 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 IL6RP08887 468 aaPredicted RBP18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 PAX9P55771 341 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 PAX8Q06710 450 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 TNFRSF9Q07011 255 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 OR4A47Q6IF82 309 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 HELZ2Q9BYK8 2649 aaKnown RBP18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 ABCA2Q9BZC7 2435 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 SRRM4A7MD48 611 aaKnown RBP18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 RELBQ01201 579 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 OR4C13Q8NGP0 309 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 FLYWCH2Q96CP2 140 aaKnown RBP18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 C1orf159Q96HA4 380 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 RAB40CQ96S21 281 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 AIFM2Q9BRQ8 373 aa18.5■□□□□ 0.55
SMARCB1-201ENST00000263121 A0A1W2PPI3 338 aa18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 KANTRA0A1W2PQU2 76 aa18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 SHOXO15266 292 aa18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 VAMP2P63027 116 aa18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 GPR157Q5UAW9 335 aa18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 HARBI1Q96MB7 349 aa18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 LYRM2Q9NU23 88 aaPredicted RBP18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 PTPN13Q12923 2485 aa18.49■□□□□ 0.55
SMARCB1-201ENST00000263121 TRAV3A0A0B4J244 114 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 GPR137BO60478 399 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 CEACAM3P40198 252 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 UBE2KP61086 200 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 PDZD9Q8IXQ8 264 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 OR2C3Q8N628 320 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 OR4A16Q8NH70 328 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 ARPC5LQ9BPX5 153 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 QTRT1Q9BXR0 403 aaKnown RBP18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 RBKSQ9H477 322 aa18.48■□□□□ 0.55
SMARCB1-201ENST00000263121 UBE2E1P51965 193 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 OR2B8PP59922 312 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 MINOS1Q5TGZ0 78 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 LHFPL4Q7Z7J7 247 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 MOB3BQ86TA1 216 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 PUSL1Q8N0Z8 303 aaKnown RBP18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 WSB1Q9Y6I7 421 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 MINOS1-NBL1R4GNA1 71 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 IGHV3-72A0A0B4J1Y9 119 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 RBMXL2O75526 392 aaKnown RBP18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 MED6O75586 246 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 MSMBP08118 114 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 TEX261Q6UWH6 196 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 SLC51BQ86UW2 128 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 ZNF429Q86V71 674 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 MS4A7Q9GZW8 240 aaPredicted RBP18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 BET1LQ9NYM9 111 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 U3KQ87 197 aa18.47■□□□□ 0.55
SMARCB1-201ENST00000263121 A0A1W2PRD5 423 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 A0A1W2PRF3 423 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 A0A1W2PRM7 423 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 FAM24AA6NFZ4 105 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 C15orf61A6NNL5 157 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 SAA1P0DJI8 122 aaPredicted RBP18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 TAS2R30P59541 319 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 PDLIM3Q53GG5 364 aaPredicted RBP18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 OR8H3Q8N146 312 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 OR8H1Q8NGG4 311 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 OR52E5Q8NH55 327 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 SMIM8Q96KF7 97 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 ZC4H2Q9NQZ6 224 aa18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 FOXA2Q9Y261 457 aaPredicted RBP18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 ANKRD17O75179 2603 aaKnown RBP18.46■□□□□ 0.55
SMARCB1-201ENST00000263121 VPS13CQ709C8 3753 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 IGSF23A1L1A6 192 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 UPK2O00526 184 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 IGLV2-23P01705 113 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 IAPPP10997 89 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 CAV2P51636 162 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 RPS16P62249 146 aaKnown RBP18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 RPL23AP62750 156 aaKnown RBP18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 HABP2Q14520 560 aaPredicted RBP18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 Q5PR19 223 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 TMEM252Q8N6L7 170 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 CYTL1Q9NRR1 136 aa18.45■□□□□ 0.54
SMARCB1-201ENST00000263121 TMEM14BQ9NUH8 114 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms