RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FOXC1Q12948 553 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 LILRA6Q6PI73 481 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 GTF3AQ92664 365 aaKnown RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 TIMD4Q96H15 378 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TMUB1Q9BVT8 246 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 IL19Q9UHD0 177 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 LEPROTL1O95214 131 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 IGHV4-34P06331 123 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 CCL8P80075 99 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 GGTLC2Q14390 218 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 ARID2Q68CP9 1835 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 MESP1Q9BRJ9 268 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TMEM160Q9NX00 188 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 RELQ04864 619 aaPredicted RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 ZNF441Q8N8Z8 693 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 RNF126Q9BV68 326 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TUBA4BQ9H853 241 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 RPRMQ9NS64 109 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 CASP8AP2Q9UKL3 1982 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 TRAV8-6A0A0B4J262 113 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 PRRG2O14669 202 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 MAFAQ8NHW3 353 aaPredicted RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 A0A1W2PN81 502 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 PRF1P14222 555 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 LHX2P50458 406 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 MMDQ15546 238 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 FAM131CQ96AQ9 280 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 PERPQ96FX8 193 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 KLK10O43240 276 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 SLC25A34Q6PIV7 304 aa6.45□□□□□ -1.38
RIF1-201ENST00000243326 LSM10Q969L4 123 aaKnown RBP6.45□□□□□ -1.38
RIF1-201ENST00000243326 KLRB1Q12918 225 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 GZMBP10144 247 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 SPANXN1Q5VSR9 72 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TMEM183AQ8IXX5 376 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TMEM189A5PLL7 270 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 M0R296 226 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 DLX1P56177 255 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TMEM38BQ9NVV0 291 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 FAM206AQ9NX38 181 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 CRIM1Q9NZV1 1036 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 COL4A5P29400 1685 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 GPR3P46089 330 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TMEM211Q6ICI0 200 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TCF24Q7RTU0 167 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TMEM208Q9BTX3 173 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 A8MXK9 166 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 CA1P00915 261 aaPredicted RBP6.44□□□□□ -1.38
RIF1-201ENST00000243326 RPL30P62888 115 aaKnown RBP6.44□□□□□ -1.38
RIF1-201ENST00000243326 WDR54Q9H977 334 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 MYOZ1Q9NP98 299 aaPredicted RBP6.44□□□□□ -1.38
RIF1-201ENST00000243326 A0A1B0GU03 582 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 NPIPB9F8W1W9 429 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 NDUFA3O95167 84 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 VDAC1P21796 283 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 FCGR2BP31994 310 aaPredicted RBP6.44□□□□□ -1.38
RIF1-201ENST00000243326 MAS1LP35410 378 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 RHBDD2Q6NTF9 364 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 HIGD1AQ9Y241 93 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 H0YIZ8 118 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 SMIM13P0DJ93 91 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 AGAP20933 346 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 EVI2AP22794 236 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 P2RX4Q99571 388 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 CISD1Q9NZ45 108 aaKnown RBP6.44□□□□□ -1.38
RIF1-201ENST00000243326 EIF4E3Q8N5X7 224 aaKnown RBP6.44□□□□□ -1.38
RIF1-201ENST00000243326 SERF1AO75920 110 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 CXCL10P02778 98 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 GFI1Q99684 422 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TXNDC17Q9BRA2 123 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 COL11A2P13942 1736 aaPredicted RBP6.44□□□□□ -1.38
RIF1-201ENST00000243326 FGF5P12034 268 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 HGFACQ04756 655 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 ANKRD33Q7Z3H0 272 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 LIFP15018 202 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 TNFSF10P50591 281 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 MMD2Q8IY49 270 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 DEPPQ9NTK1 212 aa6.44□□□□□ -1.38
RIF1-201ENST00000243326 PPIFP30405 207 aaKnown RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 SRXN1Q9BYN0 137 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 ZNF581Q9P0T4 197 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 IGHV5-10-1A0A0J9YXX1 117 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 LILRA5A6NI73 299 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 ACSF3Q4G176 576 aaPredicted RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 GOLT1AQ6ZVE7 132 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 RBFOX2O43251 390 aaKnown RBP eCLIP6.43□□□□□ -1.381e-6■■□□□ 13.1
RIF1-201ENST00000243326 OR2H2O95918 312 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 PRDX2P32119 198 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 SNRNP40Q96DI7 357 aaKnown RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 RCC1LQ96I51 464 aaKnown RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 C2orf83Q53S99 150 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 OR4D5Q8NGN0 318 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 AQP10Q96PS8 301 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 RASL11BQ9BPW5 248 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 SEBOXQ9HB31 216 aaPredicted RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 TRAV12-3A0A0B4J271 114 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 TMEM95Q3KNT9 176 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 FAM181AQ8N9Y4 354 aa6.43□□□□□ -1.38
RIF1-201ENST00000243326 RTBDNQ9BSG5 229 aaPredicted RBP6.43□□□□□ -1.38
RIF1-201ENST00000243326 MTORP42345 2549 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms