RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 THBS3P49746 956 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 TPPP2P59282 170 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 PAFAH1B2P68402 229 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 SLC35E4Q6ICL7 350 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 TEX43Q6ZNM6 134 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 COQ2Q96H96 371 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 TXNDC17Q9BRA2 123 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 TTTY12Q9BZ98 90 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 PARD6AQ9NPB6 346 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 WNT9BO14905 357 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 IRF2P14316 349 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 OR1C1Q15619 314 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 TREML4Q6UXN2 200 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 LOXL2Q9Y4K0 774 aa12.92□□□□□ -0.34
DDX55-201ENST00000238146 RRHO14718 337 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 SMPD2O60906 423 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 SERF1AO75920 110 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 RPLP1P05386 114 aaKnown RBP12.91□□□□□ -0.34
DDX55-201ENST00000238146 ESDP10768 282 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 OPRK1P41145 380 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 ZNF90Q03938 601 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 Q6ZR03 302 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 TMEM251Q8N6I4 163 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 MIEN1Q9BRT3 115 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 HES4Q9HCC6 221 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 IGHV3-43A0A0B4J1X8 118 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 A6NNC1 897 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 PATE3B3GLJ2 98 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 DLEU1O43261 78 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 TFF1P04155 84 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 IGHV3-43DP0DP04 118 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 CRISP2P16562 243 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 SSTR5P35346 364 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 TBC1D28Q2M2D7 210 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 MRPL52Q86TS9 123 aaKnown RBP12.91□□□□□ -0.34
DDX55-201ENST00000238146 HSPB9Q9BQS6 159 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 CHODLQ9H9P2 273 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 KMT2EQ8IZD2 1858 aa12.91□□□□□ -0.34
DDX55-201ENST00000238146 MPDU1O75352 247 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 CDKN1AP38936 164 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 GABRA2P47869 451 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 HLA-DRB5Q30154 266 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 DCAF12Q5T6F0 453 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 MIC13Q5XKP0 118 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 ZNF826PQ6ZT77 177 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 NANOS1Q8WY41 292 aaKnown RBP12.9□□□□□ -0.34
DDX55-201ENST00000238146 HSD17B10Q99714 261 aaKnown RBP12.9□□□□□ -0.34
DDX55-201ENST00000238146 MGST2Q99735 147 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 MRPL18Q9H0U6 180 aaKnown RBP12.9□□□□□ -0.34
DDX55-201ENST00000238146 YTHDF2Q9Y5A9 579 aaKnown RBP12.9□□□□□ -0.34
DDX55-201ENST00000238146 DEFB108AA8MXU0 73 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 SLC17A3O00476 420 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 CXorf1O96002 111 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 DUSP3P51452 185 aaPredicted RBP12.9□□□□□ -0.34
DDX55-201ENST00000238146 CXorf67Q86X51 503 aaPredicted RBP12.9□□□□□ -0.34
DDX55-201ENST00000238146 TPRX1Q8N7U7 411 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 WDR31Q8NA23 367 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 RFESDQ8TAC1 157 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 IL36BQ9NZH7 164 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 PSG11Q9UQ72 335 aa12.9□□□□□ -0.34
DDX55-201ENST00000238146 K7EN84 100 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 AQP7O14520 342 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 FOXF2Q12947 444 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 PSG7Q13046 419 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 PDLIM3Q53GG5 364 aaPredicted RBP12.89□□□□□ -0.35
DDX55-201ENST00000238146 FBXW9Q5XUX1 488 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 C6orf15Q6UXA7 325 aaPredicted RBP12.89□□□□□ -0.35
DDX55-201ENST00000238146 GGTLC1Q9BX51 225 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 MS4A5Q9H3V2 200 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 PAM16Q9Y3D7 125 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 FRMD6-AS1P0C7T7 363 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 ZNF718Q3SXZ3 478 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 AARDQ4LEZ3 155 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 GOLT1BQ9Y3E0 138 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 SIT1Q9Y3P8 196 aa12.89□□□□□ -0.35
DDX55-201ENST00000238146 TRAV9-1A0A075B6T8 112 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 PRSS46E5RG02 174 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 F2Z2F3 143 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
DDX55-201ENST00000238146 RPL31P62899 125 aaKnown RBP12.88□□□□□ -0.35
DDX55-201ENST00000238146 KRTCAP3Q53RY4 240 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 ABHD17BQ5VST6 288 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 OR13A1Q8NGR1 328 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 VN1R17PQ8TDU5 208 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 AHCTF1Q8WYP5 2266 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 J3QW42 95 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 PROP1O75360 226 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 NPSP0C0P6 89 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 COL8A2P25067 703 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 GABRA6Q16445 453 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 C11orf53Q8IXP5 236 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 OR5AU1Q8NGC0 362 aa12.88□□□□□ -0.35
DDX55-201ENST00000238146 GMPPAQ96IJ6 420 aaPredicted RBP12.88□□□□□ -0.35
DDX55-201ENST00000238146 IQCF6A8MYZ5 107 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 BRS3P32247 399 aa12.87□□□□□ -0.35
DDX55-201ENST00000238146 COMPP49747 757 aaPredicted RBP12.87□□□□□ -0.35
DDX55-201ENST00000238146 PLGLB1Q02325 96 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms