RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 LINC00574Q9H8X3 128 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 PLEKHA2Q9HB19 425 aa9.02□□□□□ -0.96
TNFAIP3-201ENST00000237289 SCGB2A1O75556 95 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 OR2A4O95047 310 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 SUB1P53999 127 aaKnown RBP eCLIP9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 LHFPL1Q86WI0 220 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 TMEM219Q86XT9 240 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 SEC22AQ96IW7 307 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 OR2A7Q96R45 310 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 PRNDQ9UKY0 176 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 I3L521 148 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 NBR2O15453 112 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 S1PR2O95136 353 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 IFNA10P01566 189 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 FBXL15Q9H469 300 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 PLEKHA3Q9HB20 300 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 PARP11Q9NR21 331 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 CACNG5Q9UF02 275 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 A0A087X0M5 115 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 A0A1B0GX30 115 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 CT45A6P0DMU7 189 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 CT45A5P0DMU8 189 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 CT45A7P0DMV0 189 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 AKIRIN2Q53H80 203 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 ALX4Q9H161 411 aaPredicted RBP9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 PRR13Q9NZ81 148 aa9.02□□□□□ -0.97
TNFAIP3-201ENST00000237289 MARCH11A6NNE9 402 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 CCSO14618 274 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 TCF21O43680 179 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 GPR137BO60478 399 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 NKX2-1P43699 371 aaPredicted RBP9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 RPL23AP62750 156 aaKnown RBP9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 NOXA1Q86UR1 476 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 FAM219AQ8IW50 185 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 MARVELD1Q9BSK0 173 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 PRSS22Q9GZN4 317 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 ACANP16112 2415 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 A0A0B4J2A0 478 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 FGF2P09038 288 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 ZNF833PQ6ZTB9 187 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 OR2T6Q8NHC8 308 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 EAF1Q96JC9 268 aaPredicted RBP9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 SHPKQ9UHJ6 478 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 NSG2Q9Y328 171 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 MOB4Q9Y3A3 225 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 H0YJW9 148 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 IFNA4P05014 189 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 C4BPBP20851 252 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 CAV2P51636 162 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 RPL8P62917 257 aaKnown RBP9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 OXA1LQ15070 435 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 VKORC1L1Q8N0U8 176 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 ZNF383Q8NA42 475 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 RTBDNQ9BSG5 229 aaPredicted RBP9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 GAB2Q9UQC2 676 aa9.01□□□□□ -0.97
TNFAIP3-201ENST00000237289 MMP9P14780 707 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 ECSCRQ19T08 205 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 RNF5Q99942 180 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 TMEM140Q9NV12 185 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 RBFOX2O43251 390 aaKnown RBP eCLIP9□□□□□ -0.976e-7■■■□□ 16.3
TNFAIP3-201ENST00000237289 HOXA3O43365 443 aaPredicted RBP9□□□□□ -0.97
TNFAIP3-201ENST00000237289 SLC35B1P78383 322 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 FGL1Q08830 312 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 TMEM65Q6PI78 240 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 INO80EQ8NBZ0 244 aaPredicted RBP9□□□□□ -0.97
TNFAIP3-201ENST00000237289 OR1L8Q8NGR8 309 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 TP53RKQ96S44 253 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 RPL27AP46776 148 aaKnown RBP9□□□□□ -0.97
TNFAIP3-201ENST00000237289 OR2B8PP59922 312 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 DIAPH2-AS1Q14236 149 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 GGNBP1Q5YKI7 109 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 LYZL2Q7Z4W2 148 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 A0A0A6YYJ9 748 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 DUXBA0A1W2PPF3 345 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 HAX1O00165 279 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 KCNAB3O43448 404 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 VENTXO95231 258 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 SPNP16150 400 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 SLC35E3Q7Z769 313 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 ZNF439Q8NDP4 499 aa9□□□□□ -0.97
TNFAIP3-201ENST00000237289 GSX1Q9H4S2 264 aaPredicted RBP9□□□□□ -0.97
TNFAIP3-201ENST00000237289 ST8SIA3O43173 380 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 RAB11AP62491 216 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 RPL30P62888 115 aaKnown RBP8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 BCL6BQ8N143 479 aaPredicted RBP8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 AGMATQ9BSE5 352 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 HSPB11Q9Y547 144 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 LINC00205P59089 165 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 FXYD3Q14802 87 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 GON7Q9BXV9 100 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 BOLA1Q9Y3E2 137 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 OR51B2Q9Y5P1 312 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 MMP24Q9Y5R2 645 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 FXYD6-FXYD2A0A087WZ82 144 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 SMCO3A2RU48 225 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 LINC00473A8K010 186 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 SIX6O95475 246 aa8.99□□□□□ -0.97
TNFAIP3-201ENST00000237289 AVPP01185 164 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms