RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 SPATA46Q5T0L3 261 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 SYT13Q7L8C5 426 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 GMPPAQ96IJ6 420 aaPredicted RBP11.95□□□□□ -0.5
SHPK-201ENST00000225519 SLC45A2Q9UMX9 530 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 LAMA1P25391 3075 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 CCL25O15444 150 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 NXPH2O95156 264 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 ZNF738Q8NE65 137 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 LINC00310P59036 64 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 VAMP3Q15836 100 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 RIPPLY2Q5TAB7 128 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 SSMEM1Q8WWF3 244 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 PRRG4Q9BZD6 226 aa11.95□□□□□ -0.5
SHPK-201ENST00000225519 CBY3A6NI87 242 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 FRMD6-AS1P0C7T7 363 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 KLF3P57682 345 aaPredicted RBP11.94□□□□□ -0.5
SHPK-201ENST00000225519 MIC13Q5XKP0 118 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 ZNF703Q9H7S9 590 aaPredicted RBP11.94□□□□□ -0.5
SHPK-201ENST00000225519 TRBV6-6A0A0A6YYG2 114 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 DNPH1O43598 174 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 PCOLCEQ15113 449 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 FAM19A2Q8N3H0 131 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 GAL3ST2Q9H3Q3 398 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 REV3LO60673 3130 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 DPRXA6NFQ7 191 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 C17orf98A8MV24 154 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 HYPMO75409 117 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 OR2H2O95918 312 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 CXorf1O96002 111 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 GDF1P27539 372 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 KRTAP27-1Q3LI81 207 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
SHPK-201ENST00000225519 KCNE4Q8WWG9 221 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 GCM1Q9NP62 436 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 DEPPQ9NTK1 212 aa11.94□□□□□ -0.5
SHPK-201ENST00000225519 FAM166BA8MTA8 275 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.93□□□□□ -0.5
SHPK-201ENST00000225519 DKK1O94907 266 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 MT-CO2P00403 227 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
SHPK-201ENST00000225519 ALKBH7Q9BT30 221 aaPredicted RBP11.93□□□□□ -0.5
SHPK-201ENST00000225519 RNF114Q9Y508 228 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 IGLC3P0DOY3 106 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 GALMQ96C23 342 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 SLC35D1Q9NTN3 355 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 SPTBN4Q9H254 2564 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 OR5B21A6NL26 309 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 LAMTOR5O43504 91 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 SRIP30626 198 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 SRD5A2P31213 254 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 LTC4SQ16873 150 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 ORAOV1Q8WV07 137 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 RNF24Q9Y225 148 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 MYO15AQ9UKN7 3530 aa11.93□□□□□ -0.5
SHPK-201ENST00000225519 SPTAN1Q13813 2472 aaKnown RBP11.92□□□□□ -0.5
SHPK-201ENST00000225519 A0A0G2JMM0 328 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 A0A1W2PPB8 328 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 A0A1W2PRS3 328 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 KIR3DP1A8MWS1 328 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 C10orf142B7Z368 130 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 OTX2P32243 289 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 Q0VG73 95 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 STUMQ69YW2 141 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 GUSBP11Q6P575 273 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 ZNF645Q8N7E2 425 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 AGBL5Q8NDL9 886 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 OR52L2PQ8NGH6 319 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 TXNDC17Q9BRA2 123 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 FAM234AQ9H0X4 552 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 FXYD3Q14802 87 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 WDR73Q6P4I2 378 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 PROK2Q9HC23 129 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 NKX6-3A6NJ46 265 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 MGST1P10620 155 aaKnown RBP11.92□□□□□ -0.5
SHPK-201ENST00000225519 LGALS4P56470 323 aa11.92□□□□□ -0.5
SHPK-201ENST00000225519 COL6A3P12111 3177 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 NCOR2Q9Y618 2525 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 TRAV9-1A0A075B6T8 112 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 NDUFB8O95169 186 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 CFIP05156 583 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 GNG4P50150 75 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 CCL7P80098 99 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 TRIM61Q5EBN2 209 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 PRAMEF5Q5TYX0 476 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 PRAMEF6Q5VXH4 476 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 COLCA1Q6ZS62 124 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 KCNS1Q96KK3 526 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 TRIOO75962 3097 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 NPIPB11E5RHQ5 1161 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 J3QT63 122 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 GDF9O60383 454 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 C3orf79P0CE67 100 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 ESDP10768 282 aa11.91□□□□□ -0.5
SHPK-201ENST00000225519 COMPP49747 757 aaPredicted RBP11.91□□□□□ -0.5
SHPK-201ENST00000225519 UBE2V1Q13404 147 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms