RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CASTOR1Q8WTX7 329 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 ARPC1AQ92747 370 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 TINAGL1Q9GZM7 467 aaPredicted RBP9.91□□□□□ -0.82
LSM5-201ENST00000223084 ZFP57Q9NU63 452 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 NDUFA13Q9P0J0 144 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 MTFP1Q9UDX5 166 aa9.91□□□□□ -0.82
LSM5-201ENST00000223084 RSL24D1Q9UHA3 163 aaKnown RBP9.91□□□□□ -0.82
LSM5-201ENST00000223084 A0A1W2PN81 502 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 ZNF701M0R085 212 aaPredicted RBP9.9□□□□□ -0.82
LSM5-201ENST00000223084 SOX15O60248 233 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 RAMP3O60896 148 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 TPPPO94811 219 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 CNIH1O95406 144 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 CD3DP04234 171 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 PSMB8P28062 276 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 CHRNA7P36544 502 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 IL18Q14116 193 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 C1QL4Q86Z23 238 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 RNF152Q8N8N0 203 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 TEX45Q8NA69 505 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 FCAMRQ8WWV6 532 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 DUX3Q96PT4 197 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 NXF2Q9GZY0 626 aaKnown RBP9.9□□□□□ -0.82
LSM5-201ENST00000223084 NOTCH1P46531 2555 aa9.9□□□□□ -0.82
LSM5-201ENST00000223084 GABARAPH6UMI1 98 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
LSM5-201ENST00000223084 IGLV1-40P01703 118 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 PF4P02776 101 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 TNFSF8P32971 234 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 KIR2DS2P43631 304 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 TMEM267Q0VDI3 215 aaPredicted RBP9.89□□□□□ -0.83
LSM5-201ENST00000223084 KIAA0141Q14154 515 aaPredicted RBP9.89□□□□□ -0.83
LSM5-201ENST00000223084 TNXAQ16473 311 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 PRSS8Q16651 343 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 DEFB136Q30KP8 78 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 VAX1Q5SQQ9 334 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 AADACL3Q5VUY0 350 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 PYHIN1Q6K0P9 492 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 SSX9Q7RTT3 188 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 ZNF695Q8IW36 515 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 OR4D10Q8NGI6 311 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 C15orf40Q8WUR7 153 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 ZNF430Q9H8G1 570 aaPredicted RBP9.89□□□□□ -0.83
LSM5-201ENST00000223084 FOXA2Q9Y261 457 aaPredicted RBP9.89□□□□□ -0.83
LSM5-201ENST00000223084 TGP01266 2768 aa9.89□□□□□ -0.83
LSM5-201ENST00000223084 G3V4G9 280 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 GPR31O00270 319 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 RLN1P04808 185 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 IFNA6P05013 189 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 APELAP0DMC3 54 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 CDX1P47902 265 aaPredicted RBP9.88□□□□□ -0.83
LSM5-201ENST00000223084 RAB9AP51151 201 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 CATR1Q13166 79 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 PHLDA2Q53GA4 152 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 ACTBL2Q562R1 376 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 RNASE10Q5GAN6 216 aaKnown RBP9.88□□□□□ -0.83
LSM5-201ENST00000223084 TMEM65Q6PI78 240 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 OR5T1Q8NG75 326 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 MYOZ3Q8TDC0 251 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 OR5B12Q96R08 314 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 GNB4Q9HAV0 340 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 BATF3Q9NR55 127 aa9.88□□□□□ -0.83
LSM5-201ENST00000223084 DPPA5A6NC42 116 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 MSGN1A6NI15 193 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 CTDSPLO15194 276 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 OR2A4O95047 310 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 RPA2P15927 270 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 CD33P20138 364 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 TAS2R19P59542 299 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 AKIRIN2Q53H80 203 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 C10orf55Q5SWW7 151 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 ASPHD1Q5U4P2 390 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 FAAP20Q6NZ36 180 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 MRPL41Q8IXM3 137 aaKnown RBP9.87□□□□□ -0.83
LSM5-201ENST00000223084 PUSL1Q8N0Z8 303 aaKnown RBP9.87□□□□□ -0.83
LSM5-201ENST00000223084 TCTEX1D1Q8N7M0 179 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 ZNF491Q8N8L2 437 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 TMEM229BQ8NBD8 167 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 SMIM4Q8WVI0 70 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 RAX2Q96IS3 184 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 RHOVQ96L33 236 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 MS4A10Q96PG2 267 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 OR2A7Q96R45 310 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 SOSTQ9BQB4 213 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 RSRP1Q9BUV0 290 aa9.87□□□□□ -0.83
LSM5-201ENST00000223084 FABP12A6NFH5 140 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 RBFOX2O43251 390 aaKnown RBP eCLIP9.86□□□□□ -0.83
LSM5-201ENST00000223084 KBTBD11O94819 623 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 S1PR2O95136 353 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 RAB3DO95716 219 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 HRASP01112 189 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 CD74P04233 296 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 MYOD1P15172 320 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 IGLL1P15814 213 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 PI3P19957 117 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 MYCNOSP40205 109 aa9.86□□□□□ -0.83
LSM5-201ENST00000223084 MRPS10P82664 201 aaKnown RBP9.86□□□□□ -0.83
LSM5-201ENST00000223084 OXLD1Q5BKU9 147 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms