RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 WDR83OSQ9Y284 106 aa14.37□□□□□ -0.11
USB1-201ENST00000219281 LAMA5O15230 3695 aa14.37□□□□□ -0.11
USB1-201ENST00000219281 USF3Q68DE3 2245 aa14.37□□□□□ -0.11
USB1-201ENST00000219281 TIMM8AO60220 97 aaPredicted RBP14.36□□□□□ -0.11
USB1-201ENST00000219281 CCL11P51671 97 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 EDDM3AQ14507 147 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 SSX9Q7RTT3 188 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 TRIB1Q96RU8 372 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 DIRC2Q96SL1 478 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 A0A1B0GV90 55 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 FCGR3BO75015 233 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 PDLIM4P50479 330 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 FABP6P51161 128 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 FAM78BQ5VT40 261 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 KCNIP4Q6PIL6 250 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 CNEP1R1Q8N9A8 125 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 FDCSPQ8NFU4 85 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 DERL1Q9BUN8 251 aa14.36□□□□□ -0.11
USB1-201ENST00000219281 PATZ1Q9HBE1 687 aaKnown RBP14.36□□□□□ -0.11
USB1-201ENST00000219281 ZNF705GA8MUZ8 300 aaPredicted RBP14.35□□□□□ -0.11
USB1-201ENST00000219281 SPINT2O43291 252 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 Q6ZT83 130 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 LINC01551Q86U37 167 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 CISD2Q8N5K1 135 aaKnown RBP14.35□□□□□ -0.11
USB1-201ENST00000219281 A0A1W2PPV4 95 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 ZNF891A8MT65 544 aaPredicted RBP14.35□□□□□ -0.11
USB1-201ENST00000219281 C15orf65H3BRN8 121 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 PDE6DO43924 150 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 NDUFB4O95168 129 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 TYMSP04818 313 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 GPR12P47775 334 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 FAM214BQ7L5A3 538 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 ZNF664Q8N3J9 261 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 CD177Q8N6Q3 437 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 TMEM178AQ8NBL3 297 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 FAM234AQ9H0X4 552 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 CACNA1DQ01668 2161 aa14.35□□□□□ -0.11
USB1-201ENST00000219281 IFNL4K9M1U5 179 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 PROP1O75360 226 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 HOXC12P31275 282 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 DUTP33316 252 aaKnown RBP14.34□□□□□ -0.11
USB1-201ENST00000219281 SMIM21Q3B7S5 101 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 WDR31Q8NA23 367 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 SDSLQ96GA7 329 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 CLCF1Q9UBD9 225 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 PGPEP1LA6NFU8 196 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 C1QTNF9P0C862 333 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 PAX1P15863 534 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 IL3RAP26951 378 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 PRAMEF5Q5TYX0 476 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 VKORC1L1Q8N0U8 176 aa14.34□□□□□ -0.11
USB1-201ENST00000219281 MKRN2OSH3BPM6 223 aa14.33□□□□□ -0.12
USB1-201ENST00000219281 IGKV3-15P01624 115 aa14.33□□□□□ -0.12
USB1-201ENST00000219281 ADH4P08319 380 aa14.33□□□□□ -0.12
USB1-201ENST00000219281 ZNF114Q8NC26 417 aa14.33□□□□□ -0.12
USB1-201ENST00000219281 OR4A16Q8NH70 328 aa14.33□□□□□ -0.12
USB1-201ENST00000219281 KCNIP2Q9NS61 270 aa14.33□□□□□ -0.12
USB1-201ENST00000219281 ZNF292O60281 2723 aa14.33□□□□□ -0.12
USB1-201ENST00000219281 A0A0U1RQK1 487 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 ZNF320A2RRD8 509 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 RRHO14718 337 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 GCGP01275 180 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 IGHV3-13P01766 116 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 IGHV3-7P01780 117 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 HTD2P86397 168 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 TCF15Q12870 199 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 VWA1Q6PCB0 445 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 TREML4Q6UXN2 200 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 LRRC29Q8WV35 223 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 HEYLQ9NQ87 328 aaPredicted RBP14.32□□□□□ -0.12
USB1-201ENST00000219281 GNG12Q9UBI6 72 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 RIF1Q5UIP0 2472 aaKnown RBP14.32□□□□□ -0.12
USB1-201ENST00000219281 TMPRSS2O15393 492 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 HPRT1P00492 218 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 RNF224P0DH78 156 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 PRDX2P32119 198 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 CNN1P51911 297 aaKnown RBP14.32□□□□□ -0.12
USB1-201ENST00000219281 LCN2P80188 198 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 Q8TCH9 128 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 RAB1CQ92928 201 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 TMEM18Q96B42 140 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 TMEM204Q9BSN7 226 aa14.32□□□□□ -0.12
USB1-201ENST00000219281 A8MWP6 167 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 M0R1X1 148 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 CECR9P0C854 216 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 KITLGP21583 273 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 SPCS3P61009 180 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 RPP30P78346 268 aaKnown RBP14.31□□□□□ -0.12
USB1-201ENST00000219281 MRPL41Q8IXM3 137 aaKnown RBP14.31□□□□□ -0.12
USB1-201ENST00000219281 WFIKKN1Q96NZ8 548 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 TRAPPC1Q9Y5R8 145 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 TRAV3A0A0B4J244 114 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 F6UZH7 168 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 ARL14EPLP0DKL9 152 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 CD99P14209 185 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 GCH1P30793 250 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 RPL15P61313 204 aaKnown RBP14.31□□□□□ -0.12
USB1-201ENST00000219281 TMEM249Q2WGJ8 235 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 MORN2Q502X0 79 aa14.31□□□□□ -0.12
USB1-201ENST00000219281 RPL39P5Q59GN2 51 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms