RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 CRYM-AS1A6NIL9 109 aa16.06■□□□□ 0.16
RHBDD3-201ENST00000216085 SLC25A17O43808 307 aa16.06■□□□□ 0.16
RHBDD3-201ENST00000216085 ATG12O94817 140 aa16.06■□□□□ 0.16
RHBDD3-201ENST00000216085 HKR1P10072 659 aa16.06■□□□□ 0.16
RHBDD3-201ENST00000216085 UBE2KP61086 200 aa16.06■□□□□ 0.16
RHBDD3-201ENST00000216085 TMEM128Q5BJH2 165 aa16.06■□□□□ 0.16
RHBDD3-201ENST00000216085 LIN54Q6MZP7 749 aa16.06■□□□□ 0.16
RHBDD3-201ENST00000216085 PIGBOS1A0A0B4J2F0 54 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 KCNAB3O43448 404 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 TSPAN9O75954 239 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 LPAR6P43657 344 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 TRIM16LQ309B1 348 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 RBMXL1Q96E39 390 aaKnown RBP16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 RHOVQ96L33 236 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 FBXL15Q9H469 300 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 S1PR2O95136 353 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 BRWD1-AS2P59051 145 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 UBE2MP61081 183 aaKnown RBP16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 BLCAPP62952 87 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 IFITM3Q01628 133 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 DHODHQ02127 395 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 Q6ZSV7 163 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 TEX45Q8NA69 505 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 DMBX1Q8NFW5 382 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 C20orf85Q9H1P6 137 aa16.05■□□□□ 0.16
RHBDD3-201ENST00000216085 A0A1B0GUS0 222 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 IGLV2-23P01705 113 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 HLA-DRB1P01911 266 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 AMY1AP04745 511 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 FOXL1Q12952 345 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 PPP1R27Q86WC6 154 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 ADAD2Q8NCV1 583 aaKnown RBP16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 R3HDM4Q96D70 268 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 TP53RKQ96S44 253 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 BEX1Q9HBH7 125 aa16.04■□□□□ 0.16
RHBDD3-201ENST00000216085 MARCH11A6NNE9 402 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 TCRBP04435 133 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 OR5AC1P0C628 307 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 SAA1P0DJI8 122 aaPredicted RBP16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 SRPXP78539 464 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 KRTAP24-1Q3LI83 254 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 GALNT14Q96FL9 552 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 TMEM222Q9H0R3 208 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 C16orf95Q9H693 158 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 SIGLEC9Q9Y336 463 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 SRRM4A7MD48 611 aaKnown RBP16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 ARPC1BO15143 372 aaKnown RBP16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 OR2A4O95047 310 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 VSIG10L2P0DP72 767 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 VAMP1P23763 118 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 UCP1P25874 307 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 VDAC2P45880 294 aaPredicted RBP16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 RELBQ01201 579 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 SSX9Q7RTT3 188 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 SLC35E3Q7Z769 313 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 SLC25A42Q86VD7 318 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 FOXRED2Q8IWF2 684 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 Q8N2B8 174 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 OR4A5Q8NH83 315 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 TMEM230Q96A57 120 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 OR2A7Q96R45 310 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 ZNF702PQ9H963 129 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 NUBP2Q9Y5Y2 271 aa16.03■□□□□ 0.16
RHBDD3-201ENST00000216085 ACTL6BO94805 426 aa16.02■□□□□ 0.15
RHBDD3-201ENST00000216085 POU2AF1Q16633 256 aa16.02■□□□□ 0.15
RHBDD3-201ENST00000216085 SP6Q3SY56 376 aa16.02■□□□□ 0.15
RHBDD3-201ENST00000216085 ZNF585BQ52M93 769 aa16.02■□□□□ 0.15
RHBDD3-201ENST00000216085 C19orf24Q9BVV8 132 aa16.02■□□□□ 0.15
RHBDD3-201ENST00000216085 NUDT15Q9NV35 164 aa16.02■□□□□ 0.15
RHBDD3-201ENST00000216085 BET1LQ9NYM9 111 aa16.02■□□□□ 0.15
RHBDD3-201ENST00000216085 KBTBD11O94819 623 aa16.01■□□□□ 0.15
RHBDD3-201ENST00000216085 KRASP01116 189 aa16.01■□□□□ 0.15
RHBDD3-201ENST00000216085 AKR1C2P52895 323 aa16.01■□□□□ 0.15
RHBDD3-201ENST00000216085 RGS21Q2M5E4 152 aa16.01■□□□□ 0.15
RHBDD3-201ENST00000216085 MMD2Q8IY49 270 aa16.01■□□□□ 0.15
RHBDD3-201ENST00000216085 VKORC1L1Q8N0U8 176 aa16.01■□□□□ 0.15
RHBDD3-201ENST00000216085 RNASE11Q8TAA1 199 aaKnown RBP16.01■□□□□ 0.15
RHBDD3-201ENST00000216085 SH2D7A6NKC9 451 aaPredicted RBP16■□□□□ 0.15
RHBDD3-201ENST00000216085 IGHG2P01859 326 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 ZNF695Q8IW36 515 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 CLCC1Q96S66 551 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 TMEM140Q9NV12 185 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 TRAV6A0A075B6T7 132 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 CLPSL1A2RUU4 121 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 AP4M1O00189 453 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 CNIH1O95406 144 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 CA2P00918 260 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 CRYGBP07316 175 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 C4orf46Q504U0 113 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 OR4A47Q6IF82 309 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 PLET1Q6UQ28 207 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 RBPMSQ93062 196 aaKnown RBP16■□□□□ 0.15
RHBDD3-201ENST00000216085 RRNAD1Q96FB5 475 aaKnown RBP16■□□□□ 0.15
RHBDD3-201ENST00000216085 FLVCR2Q9UPI3 526 aa16■□□□□ 0.15
RHBDD3-201ENST00000216085 TMEM89A2RUT3 159 aa15.99■□□□□ 0.15
RHBDD3-201ENST00000216085 CDS2O95674 445 aa15.99■□□□□ 0.15
RHBDD3-201ENST00000216085 HLA-AP01891 365 aaKnown RBP15.99■□□□□ 0.15
RHBDD3-201ENST00000216085 H2AFB2P0C5Z0 115 aa15.99■□□□□ 0.15
RHBDD3-201ENST00000216085 G6PCP35575 357 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms